RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 LRRC38Q5VT99 294 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 JADE1Q6IE81 842 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 NOTUMQ6P988 496 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 SLC27A1Q6PCB7 646 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 SLC13A5Q86YT5 568 aaPredicted RBP23.13■■□□□ 1.29
CCM2-206ENST00000474617 RHOT1Q8IXI2 618 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 KRT35Q92764 455 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 FAM84AQ96KN4 292 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 RUFY1Q96T51 708 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 SIX4Q9UIU6 781 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 IGHA2P01877 340 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 NFICP08651 508 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 CARSP49589 748 aaKnown RBP23.13■■□□□ 1.29
CCM2-206ENST00000474617 OSTNP61366 133 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 MTMR3Q13615 1198 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 MFSD10Q14728 455 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 STILQ15468 1287 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 PTPROQ16827 1216 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 SLC10A6Q3KNW5 377 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 CEP120Q8N960 986 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 FEZF2Q8TBJ5 459 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 IFT81Q8WYA0 676 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 SLCO2A1Q92959 643 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 C11orf70Q9BRQ4 267 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 DNAI2Q9GZS0 605 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 PSD3Q9NYI0 1048 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 NFU1Q9UMS0 254 aa23.13■■□□□ 1.29
CCM2-206ENST00000474617 KRT19P08727 400 aa23.12■■□□□ 1.29
CCM2-206ENST00000474617 ITGA4P13612 1032 aa23.12■■□□□ 1.29
CCM2-206ENST00000474617 YARSP54577 528 aaKnown RBP23.12■■□□□ 1.29
CCM2-206ENST00000474617 MYO1EQ12965 1108 aa23.12■■□□□ 1.29
CCM2-206ENST00000474617 SYDE1Q6ZW31 735 aaPredicted RBP23.12■■□□□ 1.29
CCM2-206ENST00000474617 SAPCD2Q86UD0 394 aa23.12■■□□□ 1.29
CCM2-206ENST00000474617 C1orf131Q8NDD1 294 aaKnown RBP23.12■■□□□ 1.29
CCM2-206ENST00000474617 SETD4Q9NVD3 440 aa23.12■■□□□ 1.29
CCM2-206ENST00000474617 AMACRQ9UHK6 382 aa23.12■■□□□ 1.29
CCM2-206ENST00000474617 RALGAPA2Q2PPJ7 1873 aa23.11■■□□□ 1.29
CCM2-206ENST00000474617 GOLGA8KD6RF30 607 aa23.11■■□□□ 1.29
CCM2-206ENST00000474617 FSCN2O14926 492 aa23.11■■□□□ 1.29
CCM2-206ENST00000474617 CD58P19256 250 aa23.11■■□□□ 1.29
CCM2-206ENST00000474617 HSPA9P38646 679 aaKnown RBP23.11■■□□□ 1.29
CCM2-206ENST00000474617 PSEN2P49810 448 aa23.11■■□□□ 1.29
CCM2-206ENST00000474617 WDR72Q3MJ13 1102 aa23.11■■□□□ 1.29
CCM2-206ENST00000474617 MMS22LQ6ZRQ5 1243 aa23.11■■□□□ 1.29
CCM2-206ENST00000474617 KATNAL2Q8IYT4 538 aa23.11■■□□□ 1.29
CCM2-206ENST00000474617 CXorf38Q8TB03 319 aa23.11■■□□□ 1.29
CCM2-206ENST00000474617 EXOC4Q96A65 974 aa23.11■■□□□ 1.29
CCM2-206ENST00000474617 ERP44Q9BS26 406 aa23.11■■□□□ 1.29
CCM2-206ENST00000474617 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.11■■□□□ 1.29
CCM2-206ENST00000474617 TLR3O15455 904 aaKnown RBP23.1■■□□□ 1.29
CCM2-206ENST00000474617 GPR32O75388 356 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 ITGB3P05106 788 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 PYGMP11217 842 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 CYP2C9P11712 490 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 DARSP14868 501 aaKnown RBP23.1■■□□□ 1.29
CCM2-206ENST00000474617 ADAM17P78536 824 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 INCA1Q0VD86 236 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 PIGHQ14442 188 aaPredicted RBP23.1■■□□□ 1.29
CCM2-206ENST00000474617 HLTFQ14527 1009 aaKnown RBP eCLIP23.1■■□□□ 1.29
CCM2-206ENST00000474617 DNAJC24Q6P3W2 148 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 CATSPER4Q7RTX7 472 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 ERICH1Q86X53 443 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 GSPT2Q8IYD1 628 aaKnown RBP23.1■■□□□ 1.29
CCM2-206ENST00000474617 NIPA2Q8N8Q9 360 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 C3orf20Q8ND61 904 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 KAT2BQ92831 832 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 ELMO3Q96BJ8 720 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 ZBTB10Q96DT7 871 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 HPDLQ96IR7 371 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 CPB2Q96IY4 423 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 ZNF668Q96K58 619 aaPredicted RBP23.1■■□□□ 1.29
CCM2-206ENST00000474617 LRRC19Q9H756 370 aa23.1■■□□□ 1.29
CCM2-206ENST00000474617 H3BQF6 201 aa23.09■■□□□ 1.29
CCM2-206ENST00000474617 XPOTO43592 962 aaKnown RBP23.09■■□□□ 1.29
CCM2-206ENST00000474617 HMGCRP04035 888 aa23.09■■□□□ 1.29
CCM2-206ENST00000474617 ZNF211Q13398 564 aaPredicted RBP23.09■■□□□ 1.29
CCM2-206ENST00000474617 LRRC52Q8N7C0 313 aa23.09■■□□□ 1.29
CCM2-206ENST00000474617 EXD1Q8NHP7 514 aa23.09■■□□□ 1.29
CCM2-206ENST00000474617 FNIP1Q8TF40 1166 aa23.09■■□□□ 1.29
CCM2-206ENST00000474617 MAGOHBQ96A72 148 aaKnown RBP23.09■■□□□ 1.29
CCM2-206ENST00000474617 DPP3Q9NY33 737 aa23.09■■□□□ 1.29
CCM2-206ENST00000474617 NXF1Q9UBU9 619 aaKnown RBP23.09■■□□□ 1.29
CCM2-206ENST00000474617 TMEM191CA6NGB0 347 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 CILPO75339 1184 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 WEE2P0C1S8 567 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 VDRP11473 427 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 AKR1A1P14550 325 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 ATF7P17544 494 aaPredicted RBP23.08■■□□□ 1.29
CCM2-206ENST00000474617 CFAP58Q5T655 872 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 LRIG3Q6UXM1 1119 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 PASD1Q8IV76 773 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 TMEM192Q8IY95 271 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 PRELID2Q8N945 189 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 GRK7Q8WTQ7 553 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 HHIPL1Q96JK4 782 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 SH3GL2Q99962 352 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 GJD2Q9UKL4 321 aa23.08■■□□□ 1.29
CCM2-206ENST00000474617 BARX2Q9UMQ3 279 aaPredicted RBP23.08■■□□□ 1.29
CCM2-206ENST00000474617 TNPO2O14787 897 aaKnown RBP23.08■■□□□ 1.28
CCM2-206ENST00000474617 TTI1O43156 1089 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms