RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 DEFB128Q7Z7B8 93 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 EPS8L1Q8TE68 723 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.8■■□□□ 1.08
CDHR3-210ENST00000474330 MIOSQ9NXC5 875 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 POLIQ9UNA4 740 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 PCDHB4Q9Y5E5 795 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 CYP11B1P15538 503 aa21.79■■□□□ 1.08
CDHR3-210ENST00000474330 BPIFB4P59827 614 aa21.79■■□□□ 1.08
CDHR3-210ENST00000474330 YWHAEP62258 255 aaKnown RBP21.79■■□□□ 1.08
CDHR3-210ENST00000474330 CYP27A1Q02318 531 aa21.79■■□□□ 1.08
CDHR3-210ENST00000474330 NAB2Q15742 525 aa21.79■■□□□ 1.08
CDHR3-210ENST00000474330 RNF169Q8NCN4 708 aa21.79■■□□□ 1.08
CDHR3-210ENST00000474330 OLIG1Q8TAK6 271 aa21.79■■□□□ 1.08
CDHR3-210ENST00000474330 AGPAT1Q99943 283 aa21.79■■□□□ 1.08
CDHR3-210ENST00000474330 FAM124BQ9H5Z6 455 aaPredicted RBP21.79■■□□□ 1.08
CDHR3-210ENST00000474330 CYP3A43Q9HB55 503 aa21.79■■□□□ 1.08
CDHR3-210ENST00000474330 CISHQ9NSE2 258 aa21.79■■□□□ 1.08
CDHR3-210ENST00000474330 CXXC1Q9P0U4 656 aaPredicted RBP21.79■■□□□ 1.08
CDHR3-210ENST00000474330 NOCTQ9UK39 431 aaKnown RBP21.79■■□□□ 1.08
CDHR3-210ENST00000474330 TDRD15B5MCY1 1934 aaKnown RBP21.79■■□□□ 1.08
CDHR3-210ENST00000474330 ENPP3O14638 875 aa21.78■■□□□ 1.08
CDHR3-210ENST00000474330 PPEF2O14830 753 aa21.78■■□□□ 1.08
CDHR3-210ENST00000474330 INPPL1O15357 1258 aa21.78■■□□□ 1.08
CDHR3-210ENST00000474330 FGBP02675 491 aa21.78■■□□□ 1.08
CDHR3-210ENST00000474330 PNPLA4P41247 253 aa21.78■■□□□ 1.08
CDHR3-210ENST00000474330 AFF1P51825 1210 aaKnown RBP21.78■■□□□ 1.08
CDHR3-210ENST00000474330 FAM109BQ6ICB4 259 aaPredicted RBP21.78■■□□□ 1.08
CDHR3-210ENST00000474330 PSRC1Q6PGN9 363 aaPredicted RBP21.78■■□□□ 1.08
CDHR3-210ENST00000474330 TMEM270Q6UE05 265 aa21.78■■□□□ 1.08
CDHR3-210ENST00000474330 ZNF662Q6ZS27 426 aa21.78■■□□□ 1.08
CDHR3-210ENST00000474330 SLC47A2Q86VL8 602 aa21.78■■□□□ 1.08
CDHR3-210ENST00000474330 SLC30A5Q8TAD4 765 aa21.78■■□□□ 1.08
CDHR3-210ENST00000474330 HERVK_113Q902F9 699 aa21.78■■□□□ 1.08
CDHR3-210ENST00000474330 PCDHA13Q9Y5I0 950 aa21.78■■□□□ 1.08
CDHR3-210ENST00000474330 EYSQ5T1H1 3165 aa21.78■■□□□ 1.08
CDHR3-210ENST00000474330 DDX3XO00571 662 aaKnown RBP eCLIP21.77■■□□□ 1.082e-8■■□□□ 11.6
CDHR3-210ENST00000474330 WEE2P0C1S8 567 aa21.77■■□□□ 1.08
CDHR3-210ENST00000474330 TNFAIP3P21580 790 aa21.77■■□□□ 1.08
CDHR3-210ENST00000474330 PDE6CP51160 858 aa21.77■■□□□ 1.08
CDHR3-210ENST00000474330 SCNN1GP51170 649 aa21.77■■□□□ 1.08
CDHR3-210ENST00000474330 Q7L0L9 218 aa21.77■■□□□ 1.08
CDHR3-210ENST00000474330 OTOP2Q7RTS6 562 aa21.77■■□□□ 1.08
CDHR3-210ENST00000474330 NOP9Q86U38 636 aaKnown RBP21.77■■□□□ 1.08
CDHR3-210ENST00000474330 RPUSD2Q8IZ73 545 aaKnown RBP21.77■■□□□ 1.08
CDHR3-210ENST00000474330 ZNF560Q96MR9 790 aa21.77■■□□□ 1.08
CDHR3-210ENST00000474330 ELAC1Q9H777 363 aaKnown RBP21.77■■□□□ 1.08
CDHR3-210ENST00000474330 GOLGA2P5Q9HBQ8 144 aa21.77■■□□□ 1.08
CDHR3-210ENST00000474330 RRAGDQ9NQL2 400 aaPredicted RBP21.77■■□□□ 1.08
CDHR3-210ENST00000474330 NENFQ9UMX5 172 aa21.77■■□□□ 1.08
CDHR3-210ENST00000474330 TTC3P53804 2025 aa21.77■■□□□ 1.07
CDHR3-210ENST00000474330 VAV2P52735 878 aa21.77■■□□□ 1.07
CDHR3-210ENST00000474330 ZNF132P52740 706 aa21.77■■□□□ 1.07
CDHR3-210ENST00000474330 TNNC1P63316 161 aa21.77■■□□□ 1.07
CDHR3-210ENST00000474330 C10orf76Q5T2E6 689 aa21.77■■□□□ 1.07
CDHR3-210ENST00000474330 CNKSR3Q6P9H4 555 aa21.77■■□□□ 1.07
CDHR3-210ENST00000474330 SCARA5Q6ZMJ2 495 aa21.77■■□□□ 1.07
CDHR3-210ENST00000474330 RBBP8NLQ8NC74 664 aaPredicted RBP21.77■■□□□ 1.07
CDHR3-210ENST00000474330 LNX1Q8TBB1 728 aaPredicted RBP21.77■■□□□ 1.07
CDHR3-210ENST00000474330 ACP6Q9NPH0 428 aa21.77■■□□□ 1.07
CDHR3-210ENST00000474330 NAGPAQ9UK23 515 aa21.77■■□□□ 1.07
CDHR3-210ENST00000474330 GBF1Q92538 1859 aa21.76■■□□□ 1.07
CDHR3-210ENST00000474330 PFKMP08237 780 aa21.76■■□□□ 1.07
CDHR3-210ENST00000474330 CD58P19256 250 aa21.76■■□□□ 1.07
CDHR3-210ENST00000474330 MAGEA1P43355 309 aa21.76■■□□□ 1.07
CDHR3-210ENST00000474330 SMAD3P84022 425 aaKnown RBP21.76■■□□□ 1.07
CDHR3-210ENST00000474330 KIAA1328Q86T90 577 aa21.76■■□□□ 1.07
CDHR3-210ENST00000474330 ZNF677Q86XU0 584 aa21.76■■□□□ 1.07
CDHR3-210ENST00000474330 GLYCTKQ8IVS8 523 aa21.76■■□□□ 1.07
CDHR3-210ENST00000474330 SLC20A1Q8WUM9 679 aa21.76■■□□□ 1.07
CDHR3-210ENST00000474330 DDX1Q92499 740 aaKnown RBP21.76■■□□□ 1.07
CDHR3-210ENST00000474330 SDCBP2Q9H190 292 aa21.76■■□□□ 1.07
CDHR3-210ENST00000474330 SMYD3Q9H7B4 428 aa21.76■■□□□ 1.07
CDHR3-210ENST00000474330 LUC7LQ9NQ29 371 aaKnown RBP21.76■■□□□ 1.07
CDHR3-210ENST00000474330 TMEM161AQ9NX61 479 aa21.76■■□□□ 1.07
CDHR3-210ENST00000474330 A0A0U1RQJ8 604 aa21.75■■□□□ 1.07
CDHR3-210ENST00000474330 CHRNB2P17787 502 aa21.75■■□□□ 1.07
CDHR3-210ENST00000474330 IBSPP21815 317 aaPredicted RBP21.75■■□□□ 1.07
CDHR3-210ENST00000474330 TAF6P49848 677 aa21.75■■□□□ 1.07
CDHR3-210ENST00000474330 CDH8P55286 799 aa21.75■■□□□ 1.07
CDHR3-210ENST00000474330 CDR2Q01850 454 aa21.75■■□□□ 1.07
CDHR3-210ENST00000474330 GRIK3Q13003 919 aa21.75■■□□□ 1.07
CDHR3-210ENST00000474330 TCTN1Q2MV58 587 aa21.75■■□□□ 1.07
CDHR3-210ENST00000474330 ALKBH5Q6P6C2 394 aaKnown RBP21.75■■□□□ 1.07
CDHR3-210ENST00000474330 NYAP1Q6ZVC0 841 aa21.75■■□□□ 1.07
CDHR3-210ENST00000474330 TTC39CQ8N584 583 aa21.75■■□□□ 1.07
CDHR3-210ENST00000474330 ATRIPQ8WXE1 791 aa21.75■■□□□ 1.07
CDHR3-210ENST00000474330 CHD7Q9P2D1 2997 aa21.75■■□□□ 1.07
CDHR3-210ENST00000474330 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.74■■□□□ 1.07
CDHR3-210ENST00000474330 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.74■■□□□ 1.07
CDHR3-210ENST00000474330 GRXCR1A8MXD5 290 aa21.74■■□□□ 1.07
CDHR3-210ENST00000474330 KPNA7A9QM74 516 aa21.74■■□□□ 1.07
CDHR3-210ENST00000474330 RPL9P32969 192 aaKnown RBP21.74■■□□□ 1.07
CDHR3-210ENST00000474330 ARHGAP25P42331 645 aa21.74■■□□□ 1.07
CDHR3-210ENST00000474330 RAP1GAPP47736 663 aa21.74■■□□□ 1.07
CDHR3-210ENST00000474330 SV2CQ496J9 727 aa21.74■■□□□ 1.07
CDHR3-210ENST00000474330 CCDC122Q5T0U0 273 aa21.74■■□□□ 1.07
CDHR3-210ENST00000474330 GLB1LQ6UWU2 654 aa21.74■■□□□ 1.07
CDHR3-210ENST00000474330 TXLNBQ8N3L3 684 aa21.74■■□□□ 1.07
CDHR3-210ENST00000474330 MMS19Q96T76 1030 aa21.74■■□□□ 1.07
CDHR3-210ENST00000474330 GDAP2Q9NXN4 497 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms