RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 CYB561D2O14569 222 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 KIAA0391O15091 583 aaKnown RBP19.37■□□□□ 0.69
UPF3A-203ENST00000474056 TGFB1I1O43294 461 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 ITGB3P05106 788 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 CYP11A1P05108 521 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 PAX3P23760 479 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 POLR2BP30876 1174 aaKnown RBP19.37■□□□□ 0.69
UPF3A-203ENST00000474056 HTR4Q13639 388 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 BECN1Q14457 450 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 SLC5A9Q2M3M2 681 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 CBWD2Q8IUF1 395 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 SUGP1Q8IWZ8 645 aaKnown RBP19.37■□□□□ 0.69
UPF3A-203ENST00000474056 ING5Q8WYH8 240 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 FGF13Q92913 245 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 BORCS6Q96GS4 357 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 ZNF560Q96MR9 790 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 OXCT2Q9BYC2 517 aaPredicted RBP19.37■□□□□ 0.69
UPF3A-203ENST00000474056 ATP6V1DQ9Y5K8 247 aa19.37■□□□□ 0.69
UPF3A-203ENST00000474056 ANHXE9PGG2 379 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 CLIC2O15247 247 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 VCPP55072 806 aaKnown RBP19.36■□□□□ 0.69
UPF3A-203ENST00000474056 TWF1Q12792 350 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 GPR17Q13304 367 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 MYBPC2Q14324 1141 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 SV2CQ496J9 727 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 OR10T2Q8NGX3 314 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 CXorf38Q8TB03 319 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 CACTINQ8WUQ7 758 aaKnown RBP19.36■□□□□ 0.69
UPF3A-203ENST00000474056 MTMR12Q9C0I1 747 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 CRISPLD1Q9H336 500 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 GDPD2Q9HCC8 539 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 AGPAT3Q9NRZ7 376 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 AGAP1Q9UPQ3 857 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 ARIH1Q9Y4X5 557 aaPredicted RBP19.36■□□□□ 0.69
UPF3A-203ENST00000474056 YIPF1Q9Y548 306 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 ZFP37Q9Y6Q3 630 aaPredicted RBP19.36■□□□□ 0.69
UPF3A-203ENST00000474056 NUMBLQ9Y6R0 609 aa19.36■□□□□ 0.69
UPF3A-203ENST00000474056 PTPRJQ12913 1337 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 MTMR11A4FU01 709 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 ZNF233A6NK53 670 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 KPNA7A9QM74 516 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 TMEM191BP0C7N4 346 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 PTPN2P17706 415 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 BMT2Q1RMZ1 405 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 WSCD1Q658N2 575 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 POTEHQ6S545 545 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 PARM1Q6UWI2 310 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 NPAS3Q8IXF0 933 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 SLC44A3Q8N4M1 653 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 FGF14Q92915 247 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 NXPE3Q969Y0 559 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 RTP3Q9BQQ7 232 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 CORO1BQ9BR76 489 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 SCAND2PQ9GZW5 306 aaPredicted RBP19.35■□□□□ 0.69
UPF3A-203ENST00000474056 AVENQ9NQS1 362 aaPredicted RBP19.35■□□□□ 0.69
UPF3A-203ENST00000474056 CEP72Q9P209 647 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 SIX4Q9UIU6 781 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 DSEQ9UL01 958 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 MAFFQ9ULX9 164 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 MRPS23Q9Y3D9 190 aaKnown RBP19.35■□□□□ 0.69
UPF3A-203ENST00000474056 DENND4CQ5VZ89 1909 aa19.35■□□□□ 0.69
UPF3A-203ENST00000474056 FAM237AA0A1B0GTK4 181 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 SYKP43405 635 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 CYP2J2P51589 502 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 NDUFA8P51970 172 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 KMT5BQ4FZB7 885 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 PRSS36Q5K4E3 855 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 HS6ST3Q8IZP7 471 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 CSGALNACT2Q8N6G5 542 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 RDH13Q8NBN7 331 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 ATAD1Q8NBU5 361 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 KIAA0895Q8NCT3 520 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 TCEAL4Q96EI5 215 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 RPP25Q9BUL9 199 aaKnown RBP19.34■□□□□ 0.69
UPF3A-203ENST00000474056 GOLPH3LQ9H4A5 285 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 EXOC1Q9NV70 894 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 INTS13Q9NVM9 706 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 USP25Q9UHP3 1055 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 ITGA11Q9UKX5 1188 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 WDFY4Q6ZS81 3184 aa19.34■□□□□ 0.69
UPF3A-203ENST00000474056 NRG2O14511 850 aaPredicted RBP19.33■□□□□ 0.68
UPF3A-203ENST00000474056 KRT19P08727 400 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 CEBPBP17676 345 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 PNPLA4P41247 253 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 CCR2P41597 374 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 CDR1P51861 262 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 STK4Q13043 487 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 DUSP4Q13115 394 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 IER5LQ5T953 404 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 CENPPQ6IPU0 288 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 METTL23Q86XA0 190 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 ELMOD1Q8N336 334 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 TTC9BQ8N6N2 239 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 FSIP1Q8NA03 581 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 OR5B17Q8NGF7 314 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 ANKRD36BP1Q96IX9 119 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 ZCWPW1Q9H0M4 648 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 KIAA1586Q9HCI6 787 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 OBSL1O75147 1896 aa19.33■□□□□ 0.68
UPF3A-203ENST00000474056 A0A1W2PQ27 194 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms