RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 MTX1Q13505 466 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 LRRC41Q15345 812 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 CCDC57Q2TAC2 916 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 CAVIN4Q5BKX8 364 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 FAM47AQ5JRC9 791 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 EPHA10Q5JZY3 1008 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 PRAMEF19Q5SWL8 479 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 JAZF1Q86VZ6 243 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 ERC1Q8IUD2 1116 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 CLASRPQ8N2M8 674 aaKnown RBP6.04□□□□□ -1.44
FN1-219ENST00000474036 SLC44A5Q8NCS7 719 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 DNERQ8NFT8 737 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 FBXW5Q969U6 566 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 EDC3Q96F86 508 aaKnown RBP6.04□□□□□ -1.44
FN1-219ENST00000474036 GPATCH3Q96I76 525 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 KAZALD1Q96I82 304 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 PUS3Q9BZE2 481 aaKnown RBP6.04□□□□□ -1.44
FN1-219ENST00000474036 CD244Q9BZW8 370 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 TMEM168Q9H0V1 697 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 IL25Q9H293 177 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 L2HGDHQ9H9P8 463 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 TMOD4Q9NZQ9 345 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 MORF4L1Q9UBU8 362 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 DSEQ9UL01 958 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 HDAC5Q9UQL6 1122 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 ATRNL1Q5VV63 1379 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 C5orf42Q9H799 3197 aa6.04□□□□□ -1.44
FN1-219ENST00000474036 TCRBV16S1A1N1A0A5B0 115 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 CCDC66A2RUB6 948 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 PLD2O14939 933 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 CTNND1O60716 968 aaKnown RBP6.03□□□□□ -1.44
FN1-219ENST00000474036 GLRX3O76003 335 aaKnown RBP6.03□□□□□ -1.44
FN1-219ENST00000474036 CKMP06732 381 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 CSF1RP07333 972 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 CYBAP13498 195 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 CSF2RAP15509 400 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 PDE6AP16499 860 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 PPIGQ13427 754 aaKnown RBP eCLIP6.03□□□□□ -1.44
FN1-219ENST00000474036 UBE4AQ14139 1066 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 TMEM240Q5SV17 173 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 ZNF585AQ6P3V2 769 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 ABHD17CQ6PCB6 329 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 LMBR1LQ6UX01 489 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 ZNF365Q70YC5 407 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 OSTM1Q86WC4 334 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 ZC3H7AQ8IWR0 971 aaKnown RBP6.03□□□□□ -1.44
FN1-219ENST00000474036 KBTBD2Q8IY47 623 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 ZGPATQ8N5A5 531 aaKnown RBP6.03□□□□□ -1.44
FN1-219ENST00000474036 NUDT10Q8NFP7 164 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 KLHDC4Q8TBB5 520 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 HERVK_113Q902F9 699 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 NUDT11Q96G61 164 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 MAGEB10Q96LZ2 347 aaPredicted RBP6.03□□□□□ -1.44
FN1-219ENST00000474036 CLIC6Q96NY7 704 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 PLA2G12BQ9BX93 195 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 UPF3BQ9BZI7 483 aaKnown RBP6.03□□□□□ -1.44
FN1-219ENST00000474036 CCDC8Q9H0W5 538 aaPredicted RBP6.03□□□□□ -1.44
FN1-219ENST00000474036 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.03□□□□□ -1.44
FN1-219ENST00000474036 NGRNQ9NPE2 291 aaKnown RBP6.03□□□□□ -1.44
FN1-219ENST00000474036 DIAPH3Q9NSV4 1193 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 CATSPERZQ9NTU4 200 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 ECHDC1Q9NTX5 307 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 COQ6Q9Y2Z9 468 aa6.03□□□□□ -1.44
FN1-219ENST00000474036 MRPL42Q9Y6G3 142 aaKnown RBP6.03□□□□□ -1.44
FN1-219ENST00000474036 TANC1Q9C0D5 1861 aa6.02□□□□□ -1.44
FN1-219ENST00000474036 TTC41PQ6P2S7 1318 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 TRIOO75962 3097 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 NPEPPSL1A6NEC2 478 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 KIAA0355O15063 1070 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 B4GALT4O60513 344 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 ASMTLO95671 621 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 PGK1P00558 417 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 SLPIP03973 132 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 C6P13671 934 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 NAT1P18440 290 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 PRDX5P30044 214 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 DNM2P50570 870 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 EPHA5P54756 1037 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 JAM2P57087 298 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 METTL24Q5JXM2 366 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 EGFLAMQ63HQ2 1017 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 CWC27Q6UX04 472 aaKnown RBP6.02□□□□□ -1.45
FN1-219ENST00000474036 ARHGAP36Q6ZRI8 547 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 KCTD1Q719H9 257 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 C16orf59Q7L2K0 433 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 OTOP2Q7RTS6 562 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 TRIM48Q8IWZ4 208 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 USP6NLQ92738 828 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 TMX3Q96JJ7 454 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 LSG1Q9H089 658 aaKnown RBP6.02□□□□□ -1.45
FN1-219ENST00000474036 KLC2Q9H0B6 622 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 MEGF9Q9H1U4 602 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 DDX4Q9NQI0 724 aaKnown RBP6.02□□□□□ -1.45
FN1-219ENST00000474036 COG5Q9UP83 839 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 TMA7Q9Y2S6 64 aaKnown RBP6.02□□□□□ -1.45
FN1-219ENST00000474036 TSC22D4Q9Y3Q8 395 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 BAHCC1Q9P281 2608 aa6.02□□□□□ -1.45
FN1-219ENST00000474036 ZFHX2Q9C0A1 2572 aaPredicted RBP6.02□□□□□ -1.45
FN1-219ENST00000474036 PTPRZ1P23471 2315 aaPredicted RBP6.02□□□□□ -1.45
FN1-219ENST00000474036 TECTAO75443 2155 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms