RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 GLI4P10075 376 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 RBP3P10745 1247 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 PSMC4P43686 418 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 EPHB4P54760 987 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 ADCY1Q08828 1119 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 LRRC32Q14392 662 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 PRKD1Q15139 912 aaPredicted RBP2.84□□□□□ -1.95
CALD1-216ENST00000473714 TESK1Q15569 626 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 UGT8Q16880 541 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 LRRC26Q2I0M4 334 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 LSM12Q3MHD2 195 aaKnown RBP2.84□□□□□ -1.95
CALD1-216ENST00000473714 MROH9Q5TGP6 573 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 BTBD8Q5XKL5 378 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 STEAP3Q658P3 488 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 MBLAC2Q68D91 279 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 IGFL4Q6B9Z1 124 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 IL31Q6EBC2 164 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 LRSAM1Q6UWE0 723 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 C17orf99Q6UX52 265 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 RNF207Q6ZRF8 634 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 OTOP3Q7RTS5 596 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 GRAMD1CQ8IYS0 662 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 PAF1Q8N7H5 531 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 C7orf31Q8N865 590 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 ZNF610Q8N9Z0 462 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 HIPK4Q8NE63 616 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 Q8TCH9 128 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 ZNF503Q96F45 646 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 ACAP3Q96P50 834 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 TUBGCP5Q96RT8 1024 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 FSD1Q9BTV5 496 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 ANO3Q9BYT9 981 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 CD244Q9BZW8 370 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.84□□□□□ -1.95
CALD1-216ENST00000473714 AP5M1Q9H0R1 490 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 QRSL1Q9H0R6 528 aaKnown RBP2.84□□□□□ -1.95
CALD1-216ENST00000473714 FAM204AQ9H8W3 233 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 PUF60Q9UHX1 559 aaKnown RBP2.84□□□□□ -1.95
CALD1-216ENST00000473714 MSRAQ9UJ68 235 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 OGDHLQ9ULD0 1010 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 EDARQ9UNE0 448 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 FZD1Q9UP38 647 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 ASPMQ8IZT6 3477 aa2.84□□□□□ -1.95
CALD1-216ENST00000473714 GAKO14976 1311 aa2.84□□□□□ -1.96
CALD1-216ENST00000473714 AOX1Q06278 1338 aa2.84□□□□□ -1.96
CALD1-216ENST00000473714 PRRC2BQ5JSZ5 2229 aaKnown RBP2.84□□□□□ -1.96
CALD1-216ENST00000473714 NCAPD2Q15021 1401 aa2.84□□□□□ -1.96
CALD1-216ENST00000473714 AK9Q5TCS8 1911 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 OTOFQ9HC10 1997 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 COL4A3Q01955 1670 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 H0Y858 1186 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 ZNF561-AS1K7EIQ3 104 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 ARNTLO00327 626 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 WNT9AO14904 365 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 HGSO14964 777 aaPredicted RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 SLC27A2O14975 620 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 NKRFO15226 690 aaKnown RBP eCLIP2.83□□□□□ -1.96
CALD1-216ENST00000473714 MAFGO15525 162 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 NARSO43776 548 aaKnown RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 DTNBO60941 627 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 H2AFYO75367 372 aaKnown RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 C8BP07358 591 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 MTHFD2P13995 350 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 PTX3P26022 381 aaPredicted RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 PPM1FP49593 454 aaPredicted RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 MECP2P51608 486 aaKnown RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 NEK3P51956 506 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 SLC16A1P53985 500 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 KRTAP10-9P60411 292 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 ERVK-21P61565 698 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 PRKCZQ05513 592 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 DMWDQ09019 674 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 SAFBQ15424 915 aaKnown RBP eCLIP2.83□□□□□ -1.96
CALD1-216ENST00000473714 SMAD2Q15796 467 aaKnown RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 KRTAP15-1Q3LI76 137 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 CRY2Q49AN0 593 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 FIGNQ5HY92 759 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 TOR2AQ5JU69 321 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 C10orf62Q5T681 223 aaPredicted RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 SLFN13Q68D06 897 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 CCDC62Q6P9F0 684 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 CCDC149Q6ZUS6 474 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 ESPNLQ6ZVH7 1005 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 CATIPQ7Z7H3 387 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 TRIM48Q8IWZ4 208 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 CMIPQ8IY22 773 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 CBARPQ8N350 705 aaPredicted RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 NEU4Q8WWR8 484 aaPredicted RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 RTF1Q92541 710 aaKnown RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 NKD2Q969F2 451 aaPredicted RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 TRIM63Q969Q1 353 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 E2F7Q96AV8 911 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 CLMNQ96JQ2 1002 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 MAP3K14Q99558 947 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 NUP88Q99567 741 aaPredicted RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 ARPC5LQ9BPX5 153 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 ZDHHC5Q9C0B5 715 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 SMURF1Q9HCE7 757 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 ZCCHC17Q9NP64 241 aaKnown RBP2.83□□□□□ -1.96
CALD1-216ENST00000473714 SLC6A20Q9NP91 592 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms