RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 ACAP3Q96P50 834 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 MRPL4Q9BYD3 311 aaKnown RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 GTPBP4Q9BZE4 634 aaKnown RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 RAB34Q9BZG1 259 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 GPR88Q9GZN0 384 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 CDT1Q9H211 546 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 BHMT2Q9H2M3 363 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 POLD4Q9HCU8 107 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 TRPV5Q9NQA5 729 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 LRWD1Q9UFC0 647 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 FBXL5Q9UKA1 691 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 MAFFQ9ULX9 164 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 ADGRG1Q9Y653 693 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 MYH15Q9Y2K3 1946 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 MTCL1Q9Y4B5 1905 aaKnown RBP7.55□□□□□ -1.2
CKS1B-205ENST00000473344 JAK2O60674 1132 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 LRP3O75074 770 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 SEC24AO95486 1093 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 ADRB1P08588 477 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 MCF2P10911 925 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 HARSP12081 509 aaKnown RBP7.55□□□□□ -1.2
CKS1B-205ENST00000473344 PDIA4P13667 645 aaKnown RBP7.55□□□□□ -1.2
CKS1B-205ENST00000473344 KCNE1P15382 129 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 GJA1P17302 382 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 CNR2P34972 360 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 VIPR2P41587 438 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 CCR2P41597 374 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 NPTX2P47972 431 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 GUCY1B3Q02153 619 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 YWHAHQ04917 246 aaPredicted RBP7.55□□□□□ -1.2
CKS1B-205ENST00000473344 SOX4Q06945 474 aaPredicted RBP7.55□□□□□ -1.2
CKS1B-205ENST00000473344 STRN3Q13033 797 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 PLD1Q13393 1074 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 ZNF174Q15697 407 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 ME3Q16798 604 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 ST3GAL2Q16842 350 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 PPM1JQ5JR12 505 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 CD300LGQ6UXG3 332 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 ALKAL1Q6UXT8 129 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 HAUS6Q7Z4H7 955 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 MFSD6LQ8IWD5 586 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 NSUN7Q8NE18 718 aaKnown RBP7.55□□□□□ -1.2
CKS1B-205ENST00000473344 DDX1Q92499 740 aaKnown RBP7.55□□□□□ -1.2
CKS1B-205ENST00000473344 ZNF775Q96BV0 537 aaPredicted RBP7.55□□□□□ -1.2
CKS1B-205ENST00000473344 DRC1Q96MC2 740 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 ZSWIM3Q96MP5 696 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 GBP4Q96PP9 640 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 ACO2Q99798 780 aaKnown RBP7.55□□□□□ -1.2
CKS1B-205ENST00000473344 PARD6AQ9NPB6 346 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 KMT5AQ9NQR1 393 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 SEMA4GQ9NTN9 838 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 DDX19AQ9NUU7 478 aaKnown RBP7.55□□□□□ -1.2
CKS1B-205ENST00000473344 CHMP5Q9NZZ3 219 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 AFF4Q9UHB7 1163 aaKnown RBP7.55□□□□□ -1.2
CKS1B-205ENST00000473344 KIAA1024Q9UPX6 916 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 DNM3Q9UQ16 869 aa7.55□□□□□ -1.2
CKS1B-205ENST00000473344 MIA3Q5JRA6 1907 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 CFAP47Q6ZTR5 3102 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 A0A1W2PRU2 124 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 RCCD1A6NED2 376 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 SLC38A8A6NNN8 435 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 HEPACAM2A8MVW5 462 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 GOLGA6L22H0YM25 854 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 SLC30A4O14863 429 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 LETM1O95202 739 aaPredicted RBP7.54□□□□□ -1.2
CKS1B-205ENST00000473344 CHRNB1P11230 501 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 TGM1P22735 817 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 MATR3P43243 847 aaKnown RBP eCLIP7.54□□□□□ -1.2
CKS1B-205ENST00000473344 ALDH1A3P47895 512 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 EPHB3P54753 998 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 MLLT6P55198 1093 aaPredicted RBP7.54□□□□□ -1.2
CKS1B-205ENST00000473344 SATB1Q01826 763 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 MRPL58Q14197 206 aaKnown RBP7.54□□□□□ -1.2
CKS1B-205ENST00000473344 TEAD2Q15562 447 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 CSRP2Q16527 193 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 XKR4Q5GH76 650 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 IL31Q6EBC2 164 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 MPZL3Q6UWV2 235 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 RNF19BQ6ZMZ0 732 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 PRR23CQ6ZRP0 262 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 CEP68Q76N32 757 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 USP37Q86T82 979 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 ZSCAN30Q86W11 494 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 LONP2Q86WA8 852 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 SPEM1Q8N4L4 309 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 SNX29Q8TEQ0 813 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 C18orf25Q96B23 403 aaPredicted RBP7.54□□□□□ -1.2
CKS1B-205ENST00000473344 C8orf76Q96K31 380 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 SUSD3Q96L08 255 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 ZMAT2Q96NC0 199 aaKnown RBP7.54□□□□□ -1.2
CKS1B-205ENST00000473344 TBC1D32Q96NH3 1257 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 PGLYRP2Q96PD5 576 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 TARS2Q9BW92 718 aaKnown RBP7.54□□□□□ -1.2
CKS1B-205ENST00000473344 OXCT2Q9BYC2 517 aaPredicted RBP7.54□□□□□ -1.2
CKS1B-205ENST00000473344 C8orf33Q9H7E9 229 aaPredicted RBP7.54□□□□□ -1.2
CKS1B-205ENST00000473344 C17orf75Q9HAS0 396 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 GRPEL1Q9HAV7 217 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 TRPV4Q9HBA0 871 aa7.54□□□□□ -1.2
CKS1B-205ENST00000473344 CEP72Q9P209 647 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms