RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 GLULP15104 373 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 NASPP49321 788 aaPredicted RBP16.56■□□□□ 0.24
VTI1A-203ENST00000472892 DUSP4Q13115 394 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 CENPPQ6IPU0 288 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 POMGNT1Q8WZA1 660 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 ZSWIM3Q96MP5 696 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 ASB16Q96NS5 453 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 PGLYRP2Q96PD5 576 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 ACCSQ96QU6 501 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 LRRC3Q9BY71 257 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 OSBPL6Q9BZF3 934 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 CRISPLD1Q9H336 500 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 ZFP14Q9HCL3 533 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 OLFML3Q9NRN5 406 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 EXOC7Q9UPT5 735 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 YIPF1Q9Y548 306 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 MYH15Q9Y2K3 1946 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 A0A087X0B3 334 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 PRR23AA6NEV1 266 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 CYP11A1P05108 521 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 PLD1Q13393 1074 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 L1TD1Q5T7N2 865 aaKnown RBP16.55■□□□□ 0.24
VTI1A-203ENST00000472892 ARMCX5Q6P1M9 558 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 NT5DC4Q86YG4 428 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 LINC00301Q8NCQ3 95 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 SMARCD2Q92925 531 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 NKD2Q969F2 451 aaPredicted RBP16.55■□□□□ 0.24
VTI1A-203ENST00000472892 BORCS6Q96GS4 357 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 DNAJC25Q9H1X3 360 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 ASAH2Q9NR71 780 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 DPP3Q9NY33 737 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 TBC1D7Q9P0N9 293 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 HSFX1Q9UBD0 423 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 DSEQ9UL01 958 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 SLC27A5Q9Y2P5 690 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 MTF2Q9Y483 593 aaPredicted RBP16.55■□□□□ 0.24
VTI1A-203ENST00000472892 PCDHB13Q9Y5F0 798 aa16.55■□□□□ 0.24
VTI1A-203ENST00000472892 MTMR11A4FU01 709 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 LRRN2O75325 713 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 IL18RAPO95256 599 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 MYL4P12829 197 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 STAT6P42226 847 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 ALDH1A3P47895 512 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 EPHB3P54753 998 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 C1orf210Q8IVY1 113 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 EFCAB13Q8IY85 973 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 ATAD1Q8NBU5 361 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 TMEM209Q96SK2 561 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 NELL2Q99435 816 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 GPR88Q9GZN0 384 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 TRPV4Q9HBA0 871 aa16.54■□□□□ 0.24
VTI1A-203ENST00000472892 FAM170BA6NMN3 283 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 CYB561D2O14569 222 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 GCNT3O95395 438 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 IDEP14735 1019 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 GJA1P17302 382 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 GARTP22102 1010 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 TAF6P49848 677 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 CASP5P51878 434 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 ALCAMQ13740 583 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 TMC8Q8IU68 726 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 OR10T2Q8NGX3 314 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 SHKBP1Q8TBC3 707 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 DNASE1L2Q92874 299 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 SNX21Q969T3 373 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 FAM213AQ9BRX8 229 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 TRMT61BQ9BVS5 477 aaKnown RBP16.53■□□□□ 0.24
VTI1A-203ENST00000472892 ZCWPW1Q9H0M4 648 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 TRPV5Q9NQA5 729 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 PANK4Q9NVE7 773 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 ASB3Q9Y575 518 aa16.53■□□□□ 0.24
VTI1A-203ENST00000472892 VPS13AQ96RL7 3174 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 SHISA7A6NL88 538 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 KPNA7A9QM74 516 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 SPTLC2O15270 562 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 PPP6R2O75170 966 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 LDHAP00338 332 aaKnown RBP16.52■□□□□ 0.24
VTI1A-203ENST00000472892 PSMC3P17980 439 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 CD72P21854 359 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 GRM2Q14416 872 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 STK38Q15208 465 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 TEAD2Q15562 447 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 DNAJB7Q7Z6W7 309 aaPredicted RBP16.52■□□□□ 0.24
VTI1A-203ENST00000472892 METTL23Q86XA0 190 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 MAML2Q8IZL2 1156 aaPredicted RBP16.52■□□□□ 0.24
VTI1A-203ENST00000472892 PDILTQ8N807 584 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 ZSWIM2Q8NEG5 633 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 ZSCAN18Q8TBC5 510 aaPredicted RBP16.52■□□□□ 0.24
VTI1A-203ENST00000472892 PYM1Q9BRP8 204 aaKnown RBP16.52■□□□□ 0.24
VTI1A-203ENST00000472892 FGFBP2Q9BYJ0 223 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 BCO2Q9BYV7 579 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 SEMA4AQ9H3S1 761 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 LTB4R2Q9NPC1 389 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 HEBP1Q9NRV9 189 aa16.52■□□□□ 0.24
VTI1A-203ENST00000472892 TFIP11Q9UBB9 837 aaKnown RBP16.52■□□□□ 0.24
VTI1A-203ENST00000472892 COL4A3Q01955 1670 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 A0A1W2PRU2 124 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 SP9P0CG40 484 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 VIPR2P41587 438 aa16.51■□□□□ 0.23
VTI1A-203ENST00000472892 TUFMP49411 452 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms