RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ELNP15502 786 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 PORP16435 677 aaPredicted RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 EN2P19622 333 aaPredicted RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 UCP3P55916 312 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 ARL4CP56559 192 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 CD83Q01151 205 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 PFKPQ01813 784 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 PLCL1Q15111 1095 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 HP1BP3Q5SSJ5 553 aaPredicted RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 SHQ1Q6PI26 577 aaKnown RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 KLHDC10Q6PID8 442 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 RNF44Q7L0R7 432 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 SYT13Q7L8C5 426 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 R3HCC1LQ7Z5L2 792 aaKnown RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 ANKRD23Q86SG2 305 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 PROSER1Q86XN7 944 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 CEP97Q8IW35 865 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 SDR16C5Q8N3Y7 309 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 CHST13Q8NET6 341 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 TDRD7Q8NHU6 1098 aaKnown RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 SMCR8Q8TEV9 937 aaPredicted RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 NUP133Q8WUM0 1156 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 RAX2Q96IS3 184 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 MPHOSPH8Q99549 860 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 TACO1Q9BSH4 297 aaKnown RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 GPR63Q9BZJ6 419 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 PCDHAC1Q9H158 963 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 RBM12Q9NTZ6 932 aaKnown RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 FRMPD1Q5SYB0 1578 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 REREQ9P2R6 1566 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 KIAA0556O60303 1618 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 PPP6R2O75170 966 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 ERAL1O75616 437 aaKnown RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 LY86O95711 162 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 IGHDP01880 384 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 LRG1P02750 347 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 THP07101 528 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 HSP90AA1P07900 732 aaKnown RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 CYP7A1P22680 504 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 AKT1P31749 480 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 MAGEA10P43363 369 aaPredicted RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 FNTBP49356 437 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 C17orf67Q0P5P2 114 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 PDE1CQ14123 709 aaPredicted RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 BOP1Q14137 746 aaKnown RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 CRB2Q5IJ48 1285 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 SNX30Q5VWJ9 437 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 OGFOD3Q6PK18 319 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 CCDC129Q6ZRS4 1044 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 KIAA0408Q6ZU52 694 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 UBE3BQ7Z3V4 1068 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 ZAR1Q86SH2 424 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 CCDC28AQ8IWP9 274 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 C3orf20Q8ND61 904 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 CREB3L4Q8TEY5 395 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 FCRL2Q96LA5 508 aaPredicted RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 GPATCH1Q9BRR8 931 aaKnown RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 ADI1Q9BV57 179 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 MECRQ9BV79 373 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 FTOQ9C0B1 505 aaKnown RBP eCLIP3.04□□□□□ -1.92
XRN1-210ENST00000472697 KIAA1683Q9H0B3 1180 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 ELAC1Q9H777 363 aaKnown RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 KRT84Q9NSB2 600 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 SEPT11Q9NVA2 429 aaKnown RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 ING3Q9NXR8 418 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.04□□□□□ -1.92
XRN1-210ENST00000472697 COA3Q9Y2R0 106 aaPredicted RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 TRIM43BA6NCK2 446 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 GOLGA6L3A6NEY3 463 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 KIF28PB7ZC32 967 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 F8W031 263 aaPredicted RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 PYCARD-AS1I3L0S3 204 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 KRIT1O00522 736 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 SEC24DO94855 1032 aaPredicted RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 PRSS23O95084 383 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 UNC5CO95185 931 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 GLI4P10075 376 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 ARP10275 920 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 ALAS1P13196 640 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 DDCP20711 480 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 HOXA10P31260 410 aaPredicted RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 SLC11A2P49281 568 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 PSMC1P62191 440 aaKnown RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 IFI35P80217 286 aaPredicted RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 CDC42EP1Q00587 391 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 BNIP3Q12983 259 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 MAPK7Q13164 816 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 LRP8Q14114 963 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 UBE3CQ15386 1083 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 MST1LQ2TV78 715 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 MFSD4BQ5TF39 518 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 KAZNQ674X7 775 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 KIAA1324Q6UXG2 1013 aaKnown RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 BTNL9Q6UXG8 535 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 TTC7BQ86TV6 843 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 TMEM130Q8N3G9 435 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 NUP43Q8NFH3 380 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 MDM1Q8TC05 714 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms