RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 USP18Q9UMW8 372 aa15.51■□□□□ 0.07
ABCF3-209ENST00000472608 GDAQ9Y2T3 454 aa15.51■□□□□ 0.07
ABCF3-209ENST00000472608 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.51■□□□□ 0.07
ABCF3-209ENST00000472608 CNOT1A5YKK6 2376 aaKnown RBP15.5■□□□□ 0.07
ABCF3-209ENST00000472608 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.5■□□□□ 0.07
ABCF3-209ENST00000472608 ANKRD63C9JTQ0 380 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 PTGESO14684 152 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 PRPF40AO75400 957 aaKnown RBP15.5■□□□□ 0.07
ABCF3-209ENST00000472608 ZMYND10O75800 440 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 PRPF6O94906 941 aaKnown RBP15.5■□□□□ 0.07
ABCF3-209ENST00000472608 LDHAP00338 332 aaKnown RBP15.5■□□□□ 0.07
ABCF3-209ENST00000472608 SPATA31D3P0C874 917 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 KCNE1P15382 129 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 FSHRP23945 695 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 ADSSP30520 456 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 MATR3P43243 847 aaKnown RBP eCLIP15.5■□□□□ 0.07
ABCF3-209ENST00000472608 PFKPQ01813 784 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 FZD5Q13467 585 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 UBXN2BQ14CS0 331 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 PPM1JQ5JR12 505 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 MAMSTRQ6ZN01 415 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 SPATA31D4Q6ZUB0 917 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 SCFD1Q8WVM8 642 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 HPS3Q969F9 1004 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 GSDMAQ96QA5 445 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 MSTO1Q9BUK6 570 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 GTPBP4Q9BZE4 634 aaKnown RBP15.5■□□□□ 0.07
ABCF3-209ENST00000472608 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.5■□□□□ 0.07
ABCF3-209ENST00000472608 KLK14Q9P0G3 267 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 CNTN3Q9P232 1028 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 AGO2Q9UKV8 859 aaKnown RBP15.5■□□□□ 0.07
ABCF3-209ENST00000472608 COL4A3Q01955 1670 aa15.5■□□□□ 0.07
ABCF3-209ENST00000472608 LRP3O75074 770 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 KIF20AO95235 890 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 PRR29P0C7W0 189 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 TDGF1P13385 188 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 HOXD13P35453 343 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 STK4Q13043 487 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 TUSC3Q13454 348 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 SLC10A6Q3KNW5 377 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 ZBTB41Q5SVQ8 909 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 MTSS1LQ765P7 747 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 PALB2Q86YC2 1186 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 CD302Q8IX05 232 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 GLIS3Q8NEA6 775 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 ST13P5Q8NFI4 369 aaPredicted RBP15.49■□□□□ 0.07
ABCF3-209ENST00000472608 TMEM174Q8WUU8 243 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 POMGNT1Q8WZA1 660 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 SLC39A2Q9NP94 309 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 RMND1Q9NWS8 449 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 GMEB2Q9UKD1 530 aa15.49■□□□□ 0.07
ABCF3-209ENST00000472608 CPSF3Q9UKF6 684 aaKnown RBP15.49■□□□□ 0.07
ABCF3-209ENST00000472608 DOCK6Q96HP0 2047 aa15.48■□□□□ 0.07
ABCF3-209ENST00000472608 SMIM28A0A1B0GU29 152 aa15.48■□□□□ 0.07
ABCF3-209ENST00000472608 TTC26A0AVF1 554 aa15.48■□□□□ 0.07
ABCF3-209ENST00000472608 SMC2O95347 1197 aa15.48■□□□□ 0.07
ABCF3-209ENST00000472608 HARSP12081 509 aaKnown RBP15.48■□□□□ 0.07
ABCF3-209ENST00000472608 TARSP26639 723 aaKnown RBP15.48■□□□□ 0.07
ABCF3-209ENST00000472608 OSTNP61366 133 aa15.48■□□□□ 0.07
ABCF3-209ENST00000472608 HSP90AA2PQ14568 343 aaPredicted RBP15.48■□□□□ 0.07
ABCF3-209ENST00000472608 NAB2Q15742 525 aa15.48■□□□□ 0.07
ABCF3-209ENST00000472608 KNOP1Q1ED39 458 aaKnown RBP15.48■□□□□ 0.07
ABCF3-209ENST00000472608 KIAA0895Q8NCT3 520 aa15.48■□□□□ 0.07
ABCF3-209ENST00000472608 GOLGA5Q8TBA6 731 aa15.48■□□□□ 0.07
ABCF3-209ENST00000472608 PPP1R10Q96QC0 940 aaKnown RBP15.48■□□□□ 0.07
ABCF3-209ENST00000472608 SLC38A7Q9NVC3 462 aa15.48■□□□□ 0.07
ABCF3-209ENST00000472608 PRG3Q9Y2Y8 225 aaPredicted RBP15.48■□□□□ 0.07
ABCF3-209ENST00000472608 CITO14578 2027 aa15.48■□□□□ 0.07
ABCF3-209ENST00000472608 TDRD15B5MCY1 1934 aaKnown RBP15.47■□□□□ 0.07
ABCF3-209ENST00000472608 SHISA7A6NL88 538 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 TISP43B9A030 160 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 NCAM2O15394 837 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 TGFB1I1O43294 461 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 CD72P21854 359 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 OR1G1P47890 313 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 PNOCQ13519 176 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 LAIR1Q6GTX8 287 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 TSSK4Q6SA08 328 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 HS2ST1Q7LGA3 356 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 C12orf56Q8IXR9 622 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 ZNF687Q8N1G0 1237 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 CELF5Q8N6W0 485 aaKnown RBP15.47■□□□□ 0.07
ABCF3-209ENST00000472608 FGF13Q92913 245 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 UROC1Q96N76 676 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 COLEC11Q9BWP8 271 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 ASB7Q9H672 318 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 RPF1Q9H9Y2 349 aaKnown RBP15.47■□□□□ 0.07
ABCF3-209ENST00000472608 KIAA1586Q9HCI6 787 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.47■□□□□ 0.07
ABCF3-209ENST00000472608 ASPMQ8IZT6 3477 aa15.47■□□□□ 0.07
ABCF3-209ENST00000472608 TRIP11Q15643 1979 aa15.46■□□□□ 0.07
ABCF3-209ENST00000472608 F5P12259 2224 aa15.46■□□□□ 0.07
ABCF3-209ENST00000472608 GOLGA6L22H0YM25 854 aa15.46■□□□□ 0.07
ABCF3-209ENST00000472608 MEFVO15553 781 aaPredicted RBP15.46■□□□□ 0.07
ABCF3-209ENST00000472608 RETP07949 1114 aa15.46■□□□□ 0.07
ABCF3-209ENST00000472608 POU2F2P09086 479 aa15.46■□□□□ 0.07
ABCF3-209ENST00000472608 HNRNPA1P09651 372 aaKnown RBP eCLIP15.46■□□□□ 0.07
ABCF3-209ENST00000472608 HOXA9P31269 272 aa15.46■□□□□ 0.07
ABCF3-209ENST00000472608 TNFSF9P41273 254 aa15.46■□□□□ 0.07
ABCF3-209ENST00000472608 CREMQ03060 361 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms