RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 RPP40O75818 363 aaKnown RBP10.21□□□□□ -0.77
VCL-204ENST00000472585 EPN2O95208 641 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 OR4Q2P0C623 313 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 CCDC192P0DO97 292 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 MYL4P12829 197 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 KCNE1P15382 129 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 PROZP22891 400 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 GRM5P41594 1212 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 NPTX2P47972 431 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 GUCY1B3Q02153 619 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 RING1Q06587 406 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 ZNF252P-AS1Q0IIN9 211 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 TWF1Q12792 350 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 MAPK7Q13164 816 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 SLC10A6Q3KNW5 377 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 DGKKQ5KSL6 1271 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 CYP4A22Q5TCH4 519 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 PDZD4Q76G19 769 aaPredicted RBP10.21□□□□□ -0.77
VCL-204ENST00000472585 TMC8Q8IU68 726 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 MFSD6LQ8IWD5 586 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 YAF2Q8IY57 180 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 ELMOD1Q8N336 334 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 TTC8Q8TAM2 541 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 SHKBP1Q8TBC3 707 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 ZSCAN18Q8TBC5 510 aaPredicted RBP10.21□□□□□ -0.77
VCL-204ENST00000472585 GTF3C6Q969F1 213 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 HAPLN2Q9GZV7 340 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 DNAJC25Q9H1X3 360 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 BHMT2Q9H2M3 363 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 C8orf33Q9H7E9 229 aaPredicted RBP10.21□□□□□ -0.77
VCL-204ENST00000472585 WDR70Q9NW82 654 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 PCDHGA4Q9Y5G9 962 aa10.21□□□□□ -0.77
VCL-204ENST00000472585 TIMM13Q9Y5L4 95 aaPredicted RBP10.21□□□□□ -0.77
VCL-204ENST00000472585 FLNBO75369 2602 aaKnown RBP10.2□□□□□ -0.78
VCL-204ENST00000472585 ARHGEF35A5YM69 484 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 SFI1A8K8P3 1242 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 E9PMD0 336 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 K7ERI5 159 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 SYN3O14994 580 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 SPINK2P20155 84 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 HOXA6P31267 233 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 MPLP40238 635 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 EFNA5P52803 228 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 MLLT6P55198 1093 aaPredicted RBP10.2□□□□□ -0.78
VCL-204ENST00000472585 PLCB2Q00722 1185 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 NBR1Q14596 966 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 IL17AQ16552 155 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 CTXN3Q4LDR2 81 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 DAB2IPQ5VWQ8 1189 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 TPGS2Q68CL5 300 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 IQCEQ6IPM2 695 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 BEST2Q8NFU1 509 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 GAB3Q8WWW8 586 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 ZCCHC14Q8WYQ9 949 aaKnown RBP10.2□□□□□ -0.78
VCL-204ENST00000472585 WASF1Q92558 559 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 DDX12PQ92771 950 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 ZFYVE19Q96K21 471 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 SUSD3Q96L08 255 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 TBC1D32Q96NH3 1257 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 SMOC1Q9H4F8 434 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 VPS45Q9NRW7 570 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 POLR3BQ9NW08 1133 aaPredicted RBP10.2□□□□□ -0.78
VCL-204ENST00000472585 CNTN3Q9P232 1028 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 TUBGCP4Q9UGJ1 667 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 PCDHGA5Q9Y5G8 931 aa10.2□□□□□ -0.78
VCL-204ENST00000472585 ATG2BQ96BY7 2078 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 TRIP11Q15643 1979 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 A0A1W2PRU2 124 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 MYBPHLA2RUH7 354 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 SLC38A8A6NNN8 435 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 RAP1GAPP47736 663 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 CDR1P51861 262 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 PEX3P56589 373 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 SPAG1Q07617 926 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 FCHO2Q0JRZ9 810 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 ZNF568Q3ZCX4 644 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 PKN3Q6P5Z2 889 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 GAREM2Q75VX8 874 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 KCNK18Q7Z418 384 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 KBTBD6Q86V97 674 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 TTC9BQ8N6N2 239 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 PTCD2Q8WV60 388 aaKnown RBP10.19□□□□□ -0.78
VCL-204ENST00000472585 E2F7Q96AV8 911 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 CHFRQ96EP1 664 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 ZNF512Q96ME7 567 aaPredicted RBP10.19□□□□□ -0.78
VCL-204ENST00000472585 EDEM2Q9BV94 578 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 RUSC1Q9BVN2 902 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 SLITRK6Q9H5Y7 841 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 BRMS1Q9HCU9 246 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 GTSE1Q9NYZ3 720 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 ARHGAP28Q9P2N2 729 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 AFF4Q9UHB7 1163 aaKnown RBP10.19□□□□□ -0.78
VCL-204ENST00000472585 KIAA1024Q9UPX6 916 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 DMXL2Q8TDJ6 3036 aa10.19□□□□□ -0.78
VCL-204ENST00000472585 ITPR1Q14643 2758 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 CCDC169A6NNP5 214 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 C4orf47A7E2U8 309 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 PP2D1A8MPX8 630 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 H7C4K7 107 aa10.18□□□□□ -0.78
VCL-204ENST00000472585 PPEF2O14830 753 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms