RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.84□□□□□ -0.35
CLRN1-205ENST00000472224 DENND4AQ7Z401 1863 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 ZNF233A6NK53 670 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 C2CD4DB7Z1M9 353 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 PI15O43692 258 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 RHOBTB3O94955 611 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 ADRB2P07550 413 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 WEE2P0C1S8 567 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 TMEM191BP0C7N4 346 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 FGFR3P22607 806 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 CLCN5P51795 746 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 ARPP19P56211 112 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 ZBTB6Q15916 424 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 VARS2Q5ST30 1063 aaKnown RBP12.83□□□□□ -0.36
CLRN1-205ENST00000472224 C9orf57Q5W0N0 161 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 PDXDC1Q6P996 788 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 SMYD4Q8IYR2 804 aaPredicted RBP12.83□□□□□ -0.36
CLRN1-205ENST00000472224 KIAA2013Q8IYS2 634 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 XXYLT1Q8NBI6 393 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 ENGASEQ8NFI3 743 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 GOLGA5Q8TBA6 731 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 LNX1Q8TBB1 728 aaPredicted RBP12.83□□□□□ -0.36
CLRN1-205ENST00000472224 TSPAN18Q96SJ8 248 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 MTMR12Q9C0I1 747 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 RXFP1Q9HBX9 757 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 TSHZ2Q9NRE2 1034 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 EP300Q09472 2414 aaPredicted RBP12.83□□□□□ -0.36
CLRN1-205ENST00000472224 DOCK6Q96HP0 2047 aa12.83□□□□□ -0.36
CLRN1-205ENST00000472224 ADAM12O43184 909 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 EXOC3O60645 756 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 SMC2O95347 1197 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 TNNC2P02585 160 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 ASGR2P07307 311 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 KRT19P08727 400 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 DLATP10515 647 aaKnown RBP12.82□□□□□ -0.36
CLRN1-205ENST00000472224 POLR2BP30876 1174 aaKnown RBP12.82□□□□□ -0.36
CLRN1-205ENST00000472224 POU5F1Q01860 360 aaKnown RBP12.82□□□□□ -0.36
CLRN1-205ENST00000472224 KCNB1Q14721 858 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 SNRNP35Q16560 246 aaKnown RBP12.82□□□□□ -0.36
CLRN1-205ENST00000472224 CES5AQ6NT32 575 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 ELMSAN1Q6PJG2 1045 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 TMC5Q6UXY8 1006 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 ANKS3Q6ZW76 656 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 APPL2Q8NEU8 664 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 CACTINQ8WUQ7 758 aaKnown RBP12.82□□□□□ -0.36
CLRN1-205ENST00000472224 SMARCE1Q969G3 411 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 ANKRD36BP1Q96IX9 119 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 SUSD3Q96L08 255 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 POMKQ9H5K3 350 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 OCEL1Q9H607 264 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 SFXN1Q9H9B4 322 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 KIAA1586Q9HCI6 787 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 RMND1Q9NWS8 449 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 FNIP2Q9P278 1114 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 CGNQ9P2M7 1197 aaKnown RBP12.82□□□□□ -0.36
CLRN1-205ENST00000472224 MTRRQ9UBK8 725 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 TIMM13Q9Y5L4 95 aaPredicted RBP12.82□□□□□ -0.36
CLRN1-205ENST00000472224 CDY1Q9Y6F8 540 aa12.82□□□□□ -0.36
CLRN1-205ENST00000472224 CHD6Q8TD26 2715 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 SYN3O14994 580 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 TGM5O43548 720 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 CALUO43852 315 aaPredicted RBP12.81□□□□□ -0.36
CLRN1-205ENST00000472224 CLSTN1O94985 981 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 KIF20AO95235 890 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 ITGB3P05106 788 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 NPR3P17342 541 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 HOXB8P17481 243 aaPredicted RBP12.81□□□□□ -0.36
CLRN1-205ENST00000472224 OR1D2P34982 312 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 TAF6P49848 677 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 SNRPFP62306 86 aaKnown RBP12.81□□□□□ -0.36
CLRN1-205ENST00000472224 BFSP1Q12934 665 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 PUM1Q14671 1186 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLRN1-205ENST00000472224 ANGPT1Q15389 498 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 CTXN3Q4LDR2 81 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 LIN9Q5TKA1 542 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 CEP135Q66GS9 1140 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 USP37Q86T82 979 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 NT5DC4Q86YG4 428 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 CCDC105Q8IYK2 499 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 GPR65Q8IYL9 337 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 CCDC127Q96BQ5 260 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 ZNF560Q96MR9 790 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 IPO9Q96P70 1041 aaKnown RBP12.81□□□□□ -0.36
CLRN1-205ENST00000472224 FNBP1Q96RU3 617 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 CLSTN3Q9BQT9 956 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 DLL3Q9NYJ7 618 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 R3HCC1Q9Y3T6 440 aaKnown RBP12.81□□□□□ -0.36
CLRN1-205ENST00000472224 NR2E1Q9Y466 385 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 CEP250Q9BV73 2442 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 PTPRJQ12913 1337 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 FANCMQ8IYD8 2048 aa12.81□□□□□ -0.36
CLRN1-205ENST00000472224 H7C4K7 107 aa12.8□□□□□ -0.36
CLRN1-205ENST00000472224 SPTLC1O15269 473 aa12.8□□□□□ -0.36
CLRN1-205ENST00000472224 PRPF40AO75400 957 aaKnown RBP12.8□□□□□ -0.36
CLRN1-205ENST00000472224 RFPL2O75678 378 aa12.8□□□□□ -0.36
CLRN1-205ENST00000472224 NR3C1P04150 777 aa12.8□□□□□ -0.36
CLRN1-205ENST00000472224 ODC1P11926 461 aa12.8□□□□□ -0.36
CLRN1-205ENST00000472224 TNNI1P19237 187 aa12.8□□□□□ -0.36
CLRN1-205ENST00000472224 LILRA4P59901 499 aa12.8□□□□□ -0.36
CLRN1-205ENST00000472224 UBE2HP62256 183 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms