RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 OAZ2O95190 189 aa21.58■■□□□ 1.05
CCDC78-208ENST00000471861 GUCY1B3Q02153 619 aa21.58■■□□□ 1.05
CCDC78-208ENST00000471861 CACNB1Q02641 598 aaPredicted RBP21.58■■□□□ 1.05
CCDC78-208ENST00000471861 YWHAHQ04917 246 aaPredicted RBP21.58■■□□□ 1.05
CCDC78-208ENST00000471861 PLA2G2CQ5R387 149 aa21.58■■□□□ 1.05
CCDC78-208ENST00000471861 KBTBD6Q86V97 674 aa21.58■■□□□ 1.05
CCDC78-208ENST00000471861 GAB3Q8WWW8 586 aa21.58■■□□□ 1.05
CCDC78-208ENST00000471861 KIAA1024Q9UPX6 916 aa21.58■■□□□ 1.05
CCDC78-208ENST00000471861 LAMA1P25391 3075 aa21.58■■□□□ 1.04
CCDC78-208ENST00000471861 SPEGQ15772 3267 aa21.58■■□□□ 1.04
CCDC78-208ENST00000471861 SOAT2O75908 522 aa21.57■■□□□ 1.04
CCDC78-208ENST00000471861 AARSP49588 968 aaKnown RBP eCLIP21.57■■□□□ 1.04
CCDC78-208ENST00000471861 SPAG1Q07617 926 aa21.57■■□□□ 1.04
CCDC78-208ENST00000471861 DMP1Q13316 513 aaPredicted RBP21.57■■□□□ 1.04
CCDC78-208ENST00000471861 ARHGAP29Q52LW3 1261 aa21.57■■□□□ 1.04
CCDC78-208ENST00000471861 STPG1Q5TH74 334 aa21.57■■□□□ 1.04
CCDC78-208ENST00000471861 C12orf50Q8NA57 414 aaPredicted RBP21.57■■□□□ 1.04
CCDC78-208ENST00000471861 CHFRQ96EP1 664 aa21.57■■□□□ 1.04
CCDC78-208ENST00000471861 LOXL4Q96JB6 756 aa21.57■■□□□ 1.04
CCDC78-208ENST00000471861 TCHPQ9BT92 498 aa21.57■■□□□ 1.04
CCDC78-208ENST00000471861 RUSC1Q9BVN2 902 aa21.57■■□□□ 1.04
CCDC78-208ENST00000471861 DDX19AQ9NUU7 478 aaKnown RBP21.57■■□□□ 1.04
CCDC78-208ENST00000471861 SPAG17Q6Q759 2223 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 MTMR11A4FU01 709 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 LRPAP1P30533 357 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 FXR2P51116 673 aaKnown RBP eCLIP21.56■■□□□ 1.04
CCDC78-208ENST00000471861 EPHB3P54753 998 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 GPR17Q13304 367 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 PLD1Q13393 1074 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 TRIM29Q14134 588 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 NOLC1Q14978 699 aaKnown RBP eCLIP21.56■■□□□ 1.04
CCDC78-208ENST00000471861 ANKRD1Q15327 319 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 CENPPQ6IPU0 288 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 SYNPOQ8N3V7 929 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 ATAD1Q8NBU5 361 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 FAM200AQ8TCP9 573 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 PSMG2Q969U7 264 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 TMEM209Q96SK2 561 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 HAPLN2Q9GZV7 340 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 KMT5AQ9NQR1 393 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 OBP2AQ9NY56 170 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 ANKFY1Q9P2R3 1169 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 SLC27A5Q9Y2P5 690 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 EML5Q05BV3 1969 aa21.56■■□□□ 1.04
CCDC78-208ENST00000471861 ZZEF1O43149 2961 aa21.55■■□□□ 1.04
CCDC78-208ENST00000471861 TSC2P49815 1807 aa21.55■■□□□ 1.04
CCDC78-208ENST00000471861 E9PMD0 336 aa21.55■■□□□ 1.04
CCDC78-208ENST00000471861 RPP40O75818 363 aaKnown RBP21.55■■□□□ 1.04
CCDC78-208ENST00000471861 KCNK5O95279 499 aa21.55■■□□□ 1.04
CCDC78-208ENST00000471861 CXCL8P10145 99 aa21.55■■□□□ 1.04
CCDC78-208ENST00000471861 MARCKSP29966 332 aaPredicted RBP21.55■■□□□ 1.04
CCDC78-208ENST00000471861 ORC2Q13416 577 aaPredicted RBP21.55■■□□□ 1.04
CCDC78-208ENST00000471861 GPR158Q5T848 1215 aa21.55■■□□□ 1.04
CCDC78-208ENST00000471861 C4orf32Q8N8J7 132 aa21.55■■□□□ 1.04
CCDC78-208ENST00000471861 ATXN3LQ9H3M9 355 aa21.55■■□□□ 1.04
CCDC78-208ENST00000471861 POLR3BQ9NW08 1133 aaPredicted RBP21.55■■□□□ 1.04
CCDC78-208ENST00000471861 FAM208BQ5VWN6 2430 aa21.54■■□□□ 1.04
CCDC78-208ENST00000471861 PPEF2O14830 753 aa21.54■■□□□ 1.04
CCDC78-208ENST00000471861 SLC16A4O15374 487 aa21.54■■□□□ 1.04
CCDC78-208ENST00000471861 GABRR2P28476 465 aa21.54■■□□□ 1.04
CCDC78-208ENST00000471861 GUCY2FP51841 1108 aa21.54■■□□□ 1.04
CCDC78-208ENST00000471861 CYP4F8P98187 520 aa21.54■■□□□ 1.04
CCDC78-208ENST00000471861 NBR1Q14596 966 aa21.54■■□□□ 1.04
CCDC78-208ENST00000471861 TCEAL6Q6IPX3 200 aa21.54■■□□□ 1.04
CCDC78-208ENST00000471861 CACNA2D4Q7Z3S7 1137 aa21.54■■□□□ 1.04
CCDC78-208ENST00000471861 DNAJB7Q7Z6W7 309 aaPredicted RBP21.54■■□□□ 1.04
CCDC78-208ENST00000471861 BPIFB1Q8TDL5 484 aa21.54■■□□□ 1.04
CCDC78-208ENST00000471861 TCEAL3Q969E4 200 aa21.54■■□□□ 1.04
CCDC78-208ENST00000471861 LSM14BQ9BX40 385 aaKnown RBP21.54■■□□□ 1.04
CCDC78-208ENST00000471861 SMG9Q9H0W8 520 aaKnown RBP21.54■■□□□ 1.04
CCDC78-208ENST00000471861 BAHCC1Q9P281 2608 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 CCDC163A0A0D9SF12 145 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 OR6C75A6NL08 312 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 DPYSL4O14531 572 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 TOM1L1O75674 476 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 MPLP40238 635 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 ALDH1A3P47895 512 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 ZBTB6Q15916 424 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 TTC38Q5R3I4 469 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 FSTL4Q6MZW2 842 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 C1orf186Q6ZWK4 172 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 KCNK18Q7Z418 384 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 HAUS6Q7Z4H7 955 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 SNX29Q8TEQ0 813 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 LPIN3Q9BQK8 851 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 OXCT2Q9BYC2 517 aaPredicted RBP21.53■■□□□ 1.04
CCDC78-208ENST00000471861 IL21Q9HBE4 155 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 LRWD1Q9UFC0 647 aa21.53■■□□□ 1.04
CCDC78-208ENST00000471861 RBM19Q9Y4C8 960 aaKnown RBP21.53■■□□□ 1.04
CCDC78-208ENST00000471861 TTC26A0AVF1 554 aa21.52■■□□□ 1.04
CCDC78-208ENST00000471861 OTOL1A6NHN0 477 aaPredicted RBP21.52■■□□□ 1.04
CCDC78-208ENST00000471861 SFI1A8K8P3 1242 aa21.52■■□□□ 1.04
CCDC78-208ENST00000471861 PP2D1A8MPX8 630 aa21.52■■□□□ 1.04
CCDC78-208ENST00000471861 PROS1P07225 676 aa21.52■■□□□ 1.04
CCDC78-208ENST00000471861 WEE1P30291 646 aa21.52■■□□□ 1.04
CCDC78-208ENST00000471861 PLCB2Q00722 1185 aa21.52■■□□□ 1.04
CCDC78-208ENST00000471861 MCL1Q07820 350 aa21.52■■□□□ 1.04
CCDC78-208ENST00000471861 ITPRIPL2Q3MIP1 535 aa21.52■■□□□ 1.04
CCDC78-208ENST00000471861 TMEM196Q5HYL7 178 aa21.52■■□□□ 1.04
CCDC78-208ENST00000471861 RINT1Q6NUQ1 792 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms