RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 TRIOO75962 3097 aa5.2□□□□□ -1.58
VPS13A-210ENST00000471439 TNKSO95271 1327 aa5.2□□□□□ -1.58
VPS13A-210ENST00000471439 TTC21BQ7Z4L5 1316 aa5.2□□□□□ -1.58
VPS13A-210ENST00000471439 NPC1L1Q9UHC9 1359 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 A0A1W2PRX2 142 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 K7ESF4 209 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 ALDH1L1O75891 902 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 TOX4O94842 621 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 SGPL1O95470 568 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 S100BP04271 92 aaPredicted RBP5.19□□□□□ -1.58
VPS13A-210ENST00000471439 C1SP09871 688 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 RPS19P39019 145 aaKnown RBP5.19□□□□□ -1.58
VPS13A-210ENST00000471439 FKBP1BP68106 108 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 CXCL9Q07325 125 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 INAVAQ3KP66 663 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 NRN1LQ496H8 165 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 KIAA1841Q6NSI8 718 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 BMP8AQ7Z5Y6 402 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 CXorf67Q86X51 503 aaPredicted RBP5.19□□□□□ -1.58
VPS13A-210ENST00000471439 SLC16A11Q8NCK7 471 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 GCDHQ92947 438 aaPredicted RBP5.19□□□□□ -1.58
VPS13A-210ENST00000471439 DCPSQ96C86 337 aaKnown RBP5.19□□□□□ -1.58
VPS13A-210ENST00000471439 WDR92Q96MX6 357 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 PSMD1Q99460 953 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS13A-210ENST00000471439 CNOT7Q9UIV1 285 aaKnown RBP5.19□□□□□ -1.58
VPS13A-210ENST00000471439 NOC2LQ9Y3T9 749 aaKnown RBP5.19□□□□□ -1.58
VPS13A-210ENST00000471439 TESMINQ9Y4I5 508 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 PPP2R3BQ9Y5P8 575 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 SNED1Q8TER0 1413 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 ANKRD17O75179 2603 aaKnown RBP5.19□□□□□ -1.58
VPS13A-210ENST00000471439 CGNL1Q0VF96 1302 aa5.19□□□□□ -1.58
VPS13A-210ENST00000471439 PLXNA3P51805 1871 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 A0A0A6YYJ9 748 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 STC2O76061 302 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 CFBP00751 764 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 KLF1Q13351 362 aaPredicted RBP5.18□□□□□ -1.58
VPS13A-210ENST00000471439 TTF1Q15361 905 aaPredicted RBP5.18□□□□□ -1.58
VPS13A-210ENST00000471439 GAREM2Q75VX8 874 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 NME9Q86XW9 330 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 D2HGDHQ8N465 521 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 PIK3C3Q8NEB9 887 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 PRSS33Q8NF86 280 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 IL17DQ8TAD2 202 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 DIS3LQ8TF46 1054 aaKnown RBP5.18□□□□□ -1.58
VPS13A-210ENST00000471439 LMBR1Q8WVP7 490 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 RABGGTAQ92696 567 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 RPGRQ92834 1020 aaKnown RBP5.18□□□□□ -1.58
VPS13A-210ENST00000471439 ANO3Q9BYT9 981 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 NARFQ9UHQ1 456 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 FAM205AQ6ZU69 1335 aa5.18□□□□□ -1.58
VPS13A-210ENST00000471439 KIF24Q5T7B8 1368 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 LRRC37A2A6NM11 1700 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 VPS13AQ96RL7 3174 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 LAMB1P07942 1786 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 UBE2QL1A1L167 161 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 PRSS38A1L453 326 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 CAPN14A8MX76 684 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 TFRCP02786 760 aaKnown RBP5.17□□□□□ -1.58
VPS13A-210ENST00000471439 MYBL2P10244 700 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 GPR3P46089 330 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 NEK2P51955 445 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 MANFP55145 182 aaKnown RBP5.17□□□□□ -1.58
VPS13A-210ENST00000471439 BCAR1P56945 870 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 MCL1Q07820 350 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 ARHGEF6Q15052 776 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 PCBP2Q15366 365 aaKnown RBP eCLIP5.17□□□□□ -1.581e-9■■■■■ 48.2
VPS13A-210ENST00000471439 CT83Q5H943 113 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 AKNAD1Q5T1N1 836 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 CCDC62Q6P9F0 684 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 Q6ZRM9 215 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 FRMD7Q6ZUT3 714 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 ZZZ3Q8IYH5 903 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 PLA2G15Q8NCC3 412 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 RAPGEF4Q8WZA2 1011 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 IP6K1Q92551 441 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 CEP89Q96ST8 783 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 FDXACB1Q9BRP7 624 aaPredicted RBP5.17□□□□□ -1.58
VPS13A-210ENST00000471439 NOL10Q9BSC4 688 aaKnown RBP5.17□□□□□ -1.58
VPS13A-210ENST00000471439 SLC6A15Q9H2J7 730 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 CCM2LQ9NUG4 571 aaPredicted RBP5.17□□□□□ -1.58
VPS13A-210ENST00000471439 EDARQ9UNE0 448 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 CDHR2Q9BYE9 1310 aa5.17□□□□□ -1.58
VPS13A-210ENST00000471439 CHD9Q3L8U1 2897 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 COL4A6Q14031 1691 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 GOLGA8AA7E2F4 631 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 GOLGA8BA8MQT2 603 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 SLPIP03973 132 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 LPLP06858 475 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 ACRV1P26436 265 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 HIBADHP31937 336 aaKnown RBP5.16□□□□□ -1.58
VPS13A-210ENST00000471439 INHBEP58166 350 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 ADCY1Q08828 1119 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 KLF10Q13118 480 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 LRRC41Q15345 812 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 PTPN21Q16825 1174 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 FAM214AQ32MH5 1076 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 PITRM1Q5JRX3 1037 aa5.16□□□□□ -1.58
VPS13A-210ENST00000471439 TIGD7Q6NT04 549 aaPredicted RBP5.16□□□□□ -1.58
VPS13A-210ENST00000471439 SGMS1Q86VZ5 419 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms