RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 BBC3Q96PG8 261 aaPredicted RBP7.21□□□□□ -1.26
CCDC39-202ENST00000471307 IMPG2Q9BZV3 1241 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 TCF7L1Q9HCS4 588 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 TYW1Q9NV66 732 aaKnown RBP7.21□□□□□ -1.26
CCDC39-202ENST00000471307 FOXJ2Q9P0K8 574 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 PTGFRNQ9P2B2 879 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 CFAP97Q9P2B7 532 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 CFTRP13569 1480 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 CCDC151A5D8V7 595 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 SUN1O94901 812 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 PDCP20941 246 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 SMARCA1P28370 1054 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 SF3B3Q15393 1217 aaKnown RBP7.2□□□□□ -1.26
CCDC39-202ENST00000471307 VWA1Q6PCB0 445 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 MICALCLQ6ZW33 695 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 TMPRSS9Q7Z410 1059 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 ZBTB46Q86UZ6 589 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 SLC17A8Q8NDX2 589 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 TMEM125Q96AQ2 219 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 NUP88Q99567 741 aaPredicted RBP7.2□□□□□ -1.26
CCDC39-202ENST00000471307 HEPHQ9BQS7 1158 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 SIK2Q9H0K1 926 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 WDCPQ9H6R7 721 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 BRD9Q9H8M2 597 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.2□□□□□ -1.26
CCDC39-202ENST00000471307 SALL3Q9BXA9 1300 aa7.2□□□□□ -1.26
CCDC39-202ENST00000471307 YY2O15391 372 aa7.19□□□□□ -1.26
CCDC39-202ENST00000471307 MPPED1O15442 326 aa7.19□□□□□ -1.26
CCDC39-202ENST00000471307 ORC4O43929 436 aa7.19□□□□□ -1.26
CCDC39-202ENST00000471307 PLA2G5P39877 138 aa7.19□□□□□ -1.26
CCDC39-202ENST00000471307 CACNA2D1P54289 1103 aa7.19□□□□□ -1.26
CCDC39-202ENST00000471307 PREPLQ4J6C6 727 aaPredicted RBP7.19□□□□□ -1.26
CCDC39-202ENST00000471307 SYCE2Q6PIF2 218 aa7.19□□□□□ -1.26
CCDC39-202ENST00000471307 RD3Q7Z3Z2 195 aa7.19□□□□□ -1.26
CCDC39-202ENST00000471307 SNX19Q92543 992 aa7.19□□□□□ -1.26
CCDC39-202ENST00000471307 FAM167AQ96KS9 214 aa7.19□□□□□ -1.26
CCDC39-202ENST00000471307 SMOQ99835 787 aa7.19□□□□□ -1.26
CCDC39-202ENST00000471307 VSX1Q9NZR4 365 aaPredicted RBP7.19□□□□□ -1.26
CCDC39-202ENST00000471307 SLC45A2Q9UMX9 530 aa7.19□□□□□ -1.26
CCDC39-202ENST00000471307 POU2F2P09086 479 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 AKAP5P24588 427 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 CD38P28907 300 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 HK3P52790 923 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 FBXO42Q6P3S6 717 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 ADGRG5Q8IZF4 528 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 FAM98AQ8NCA5 519 aaKnown RBP7.18□□□□□ -1.26
CCDC39-202ENST00000471307 POC1BQ8TC44 478 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 RGMAQ96B86 450 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 HSPBAP1Q96EW2 488 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 PGBD1Q96JS3 809 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 TRIB1Q96RU8 372 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 R3HDMLQ9H3Y0 253 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 PRDM13Q9H4Q3 707 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 GPR35Q9HC97 309 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 ZDHHC8Q9ULC8 765 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 LUC7L2Q9Y383 392 aaKnown RBP7.18□□□□□ -1.26
CCDC39-202ENST00000471307 SPATA31A3Q5VYP0 1347 aa7.18□□□□□ -1.26
CCDC39-202ENST00000471307 COL11A2P13942 1736 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-202ENST00000471307 ANKRD62A6NC57 917 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 TOR1BO14657 336 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 SOAT2O75908 522 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 GJB1P08034 283 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 PRDX5P30044 214 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 PIK3CGP48736 1102 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 NOGQ13253 232 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 TAPT1Q6NXT6 567 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 FAM90A1Q86YD7 464 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 GPATCH3Q96I76 525 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 CNPPD1Q9BV87 410 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 KMT5AQ9NQR1 393 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 SLC17A6Q9P2U8 582 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 FEZ2Q9UHY8 353 aaPredicted RBP7.17□□□□□ -1.26
CCDC39-202ENST00000471307 PCSK5Q92824 1860 aa7.17□□□□□ -1.26
CCDC39-202ENST00000471307 LAMC3Q9Y6N6 1575 aa7.16□□□□□ -1.26
CCDC39-202ENST00000471307 E9PLN8 166 aa7.16□□□□□ -1.26
CCDC39-202ENST00000471307 GATA3P23771 443 aa7.16□□□□□ -1.26
CCDC39-202ENST00000471307 NEK2P51955 445 aa7.16□□□□□ -1.26
CCDC39-202ENST00000471307 TCF15Q12870 199 aa7.16□□□□□ -1.26
CCDC39-202ENST00000471307 KIF22Q14807 665 aa7.16□□□□□ -1.26
CCDC39-202ENST00000471307 PTPRRQ15256 657 aa7.16□□□□□ -1.26
CCDC39-202ENST00000471307 CD300EQ496F6 205 aaPredicted RBP7.16□□□□□ -1.26
CCDC39-202ENST00000471307 BOLLQ8N9W6 283 aaKnown RBP7.16□□□□□ -1.26
CCDC39-202ENST00000471307 DDX17Q92841 729 aaKnown RBP7.16□□□□□ -1.26
CCDC39-202ENST00000471307 VKORC1Q9BQB6 163 aa7.16□□□□□ -1.26
CCDC39-202ENST00000471307 SEMA4GQ9NTN9 838 aa7.16□□□□□ -1.26
CCDC39-202ENST00000471307 POLRMTO00411 1230 aaKnown RBP7.15□□□□□ -1.26
CCDC39-202ENST00000471307 IL33O95760 270 aa7.15□□□□□ -1.26
CCDC39-202ENST00000471307 RARBP10826 455 aa7.15□□□□□ -1.26
CCDC39-202ENST00000471307 NXPH1P58417 271 aa7.15□□□□□ -1.26
CCDC39-202ENST00000471307 ITIH3Q06033 890 aa7.15□□□□□ -1.26
CCDC39-202ENST00000471307 CCDC142Q17RM4 750 aa7.15□□□□□ -1.26
CCDC39-202ENST00000471307 PGS1Q32NB8 556 aa7.15□□□□□ -1.26
CCDC39-202ENST00000471307 ZNF362Q5T0B9 420 aaPredicted RBP7.15□□□□□ -1.26
CCDC39-202ENST00000471307 KAZNQ674X7 775 aa7.15□□□□□ -1.26
CCDC39-202ENST00000471307 HEATR3Q7Z4Q2 680 aa7.15□□□□□ -1.26
CCDC39-202ENST00000471307 GRASPQ7Z6J2 395 aaPredicted RBP7.15□□□□□ -1.26
CCDC39-202ENST00000471307 OSBPL9Q96SU4 736 aa7.15□□□□□ -1.26
CCDC39-202ENST00000471307 KIAA1586Q9HCI6 787 aa7.15□□□□□ -1.26
CCDC39-202ENST00000471307 PCDHA3Q9Y5H8 950 aa7.15□□□□□ -1.26
CCDC39-202ENST00000471307 SPATA31A6Q5VVP1 1343 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms