RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 CASD1Q96PB1 797 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 AGPAT1Q99943 283 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 MRPL9Q9BYD2 267 aaKnown RBP9.31□□□□□ -0.92
HDLBP-233ENST00000470710 SDCBP2Q9H190 292 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 SMYD3Q9H7B4 428 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 GOLGA2P5Q9HBQ8 144 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 SPTLC3Q9NUV7 552 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 PRKAG2Q9UGJ0 569 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 BARX2Q9UMQ3 279 aaPredicted RBP9.31□□□□□ -0.92
HDLBP-233ENST00000470710 NENFQ9UMX5 172 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 INPP5FQ9Y2H2 1132 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 PPP2R2CQ9Y2T4 447 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 REXO2Q9Y3B8 237 aaKnown RBP9.31□□□□□ -0.92
HDLBP-233ENST00000470710 SNX9Q9Y5X1 595 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 ATP8B3O60423 1300 aa9.31□□□□□ -0.92
HDLBP-233ENST00000470710 GOLGA6L9A6NEM1 432 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 CASTOR2A6NHX0 329 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 TMEM189-UBE2V1I3L0A0 370 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 DDX3XO00571 662 aaKnown RBP eCLIP9.3□□□□□ -0.92
HDLBP-233ENST00000470710 ZNF263O14978 683 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 SPTLC1O15269 473 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 ZNF500O60304 480 aaPredicted RBP9.3□□□□□ -0.92
HDLBP-233ENST00000470710 BAIAP3O94812 1187 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 PAEPP09466 180 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 CSF2RAP15509 400 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 CD58P19256 250 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 IBSPP21815 317 aaPredicted RBP9.3□□□□□ -0.92
HDLBP-233ENST00000470710 CDR2Q01850 454 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 PPIGQ13427 754 aaKnown RBP eCLIP9.3□□□□□ -0.929e-13■□□□□ 8.8
HDLBP-233ENST00000470710 C10orf76Q5T2E6 689 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 DCLRE1AQ6PJP8 1040 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 ZNF662Q6ZS27 426 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 DPH6Q7L8W6 267 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 NOP9Q86U38 636 aaKnown RBP9.3□□□□□ -0.92
HDLBP-233ENST00000470710 UNC93AQ86WB7 457 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 TXLNBQ8N3L3 684 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 TOP6BLQ8N6T0 577 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 ACRBPQ8NEB7 543 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 TET1Q8NFU7 2136 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 SPATA18Q8TC71 538 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 SLC20A1Q8WUM9 679 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 DDX1Q92499 740 aaKnown RBP9.3□□□□□ -0.92
HDLBP-233ENST00000470710 MMS19Q96T76 1030 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 DESI2Q9BSY9 194 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 IL23AQ9NPF7 189 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 LUC7LQ9NQ29 371 aaKnown RBP9.3□□□□□ -0.92
HDLBP-233ENST00000470710 TBC1D13Q9NVG8 400 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 ADAMTS1Q9UHI8 967 aa9.3□□□□□ -0.92
HDLBP-233ENST00000470710 TTC3P53804 2025 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 A0A087X0T9 212 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 HUS1O60921 280 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 AMHP03971 560 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 FAM228BP0C875 321 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 CHRNB2P17787 502 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 TNFAIP3P21580 790 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 WARSP23381 471 aaKnown RBP9.29□□□□□ -0.92
HDLBP-233ENST00000470710 GNA15P30679 374 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 RAP1GAPP47736 663 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 CLCNKBP51801 687 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 RAD23BP54727 409 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 CDH8P55286 799 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 FMO1Q01740 532 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 GFPT1Q06210 699 aaPredicted RBP9.29□□□□□ -0.92
HDLBP-233ENST00000470710 SOWAHAQ2M3V2 549 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 ALKBH5Q6P6C2 394 aaKnown RBP9.29□□□□□ -0.92
HDLBP-233ENST00000470710 CD300LGQ6UXG3 332 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 TRIM72Q6ZMU5 477 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.29□□□□□ -0.922e-9■□□□□ 10
HDLBP-233ENST00000470710 GLYCTKQ8IVS8 523 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 REXO1L1PQ8IX06 675 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 COLGALT2Q8IYK4 626 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 C17orf53Q8N3J3 647 aaPredicted RBP9.29□□□□□ -0.92
HDLBP-233ENST00000470710 C3orf58Q8NDZ4 430 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 APPL2Q8NEU8 664 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 LNX1Q8TBB1 728 aaPredicted RBP9.29□□□□□ -0.92
HDLBP-233ENST00000470710 WHAMMQ8TF30 809 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 PPP1R13BQ96KQ4 1090 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.29□□□□□ -0.92
HDLBP-233ENST00000470710 HTATIP2Q9BUP3 242 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 NT5C1AQ9BXI3 368 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 ELOVL4Q9GZR5 314 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 NAGPAQ9UK23 515 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 KIAA1257Q9ULG3 409 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 L1RE1Q9UN81 338 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 PCDHA13Q9Y5I0 950 aa9.29□□□□□ -0.92
HDLBP-233ENST00000470710 ARHGEF37A1IGU5 675 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 USP27XA6NNY8 438 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 M0QZQ0 153 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 CYB561D2O14569 222 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 GABRDO14764 452 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 B4GALT3O60512 393 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 DGKIO75912 1065 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 B3GAT3O94766 335 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 DDHD2O94830 711 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 LSM8O95777 96 aaKnown RBP9.28□□□□□ -0.92
HDLBP-233ENST00000470710 CYP11A1P05108 521 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 MMEP08473 750 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 GZMAP12544 262 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 MAGEA1P43355 309 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 GATMP50440 423 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms