RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 NUB1Q9Y5A7 615 aa13.16□□□□□ -0.3
LSM2-209ENST00000470083 ASCC3Q8N3C0 2202 aaKnown RBP13.16□□□□□ -0.3
LSM2-209ENST00000470083 EIF4E1BA6NMX2 242 aaKnown RBP13.15□□□□□ -0.3
LSM2-209ENST00000470083 UPK3BL1B0FP48 263 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 UPK3BL2E5RIL1 263 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 CCNT1O60563 726 aaKnown RBP13.15□□□□□ -0.3
LSM2-209ENST00000470083 VNN2O95498 520 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 FGF19O95750 216 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 EDN1P05305 212 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 CPA1P15085 419 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 DRD1P21728 446 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 ARHGAP15Q53QZ3 475 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 GPR158Q5T848 1215 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 ALKAL1Q6UXT8 129 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 MAEAQ7L5Y9 396 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 ACDQ96AP0 544 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 NAP1L4Q99733 375 aaKnown RBP13.15□□□□□ -0.3
LSM2-209ENST00000470083 FAM83CQ9BQN1 747 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 ATXN3LQ9H3M9 355 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 TOPORSQ9NS56 1045 aaPredicted RBP13.15□□□□□ -0.3
LSM2-209ENST00000470083 ASB3Q9Y575 518 aa13.15□□□□□ -0.3
LSM2-209ENST00000470083 APC2O95996 2303 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 PDCD11Q14690 1871 aaKnown RBP13.14□□□□□ -0.31
LSM2-209ENST00000470083 ARID2Q68CP9 1835 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 ADAMTS20P59510 1910 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 OTOL1A6NHN0 477 aaPredicted RBP13.14□□□□□ -0.31
LSM2-209ENST00000470083 PCNX2A6NKB5 2137 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 SEC24BO95487 1268 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 LIG1P18858 919 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 RPL9P32969 192 aaKnown RBP13.14□□□□□ -0.31
LSM2-209ENST00000470083 DGKEP52429 567 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 AMPD2Q01433 879 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 SCAPQ12770 1279 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 SEMA3BQ13214 749 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 RUNX3Q13761 415 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 DMC1Q14565 340 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 USP39Q53GS9 565 aaKnown RBP13.14□□□□□ -0.31
LSM2-209ENST00000470083 APBB1IPQ7Z5R6 666 aaPredicted RBP13.14□□□□□ -0.31
LSM2-209ENST00000470083 CHCHD4Q8N4Q1 142 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 RPLP0P6Q8NHW5 317 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 ADAM32Q8TC27 787 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 PIGOQ8TEQ8 1089 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 BSNDQ8WZ55 320 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 DDX12PQ92771 950 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 CRISPLD1Q9H336 500 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 TASP1Q9H6P5 420 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 NCOA5Q9HCD5 579 aaKnown RBP13.14□□□□□ -0.31
LSM2-209ENST00000470083 HPS4Q9NQG7 708 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 GKN1Q9NS71 199 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 ACACAQ13085 2346 aa13.14□□□□□ -0.31
LSM2-209ENST00000470083 KALRNO60229 2985 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 DEXIO95424 95 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 BAG4O95429 457 aaKnown RBP13.13□□□□□ -0.31
LSM2-209ENST00000470083 XRCC6P12956 609 aaKnown RBP eCLIP13.13□□□□□ -0.31
LSM2-209ENST00000470083 GABRR2P28476 465 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 MCM4P33991 863 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 GRM5P41594 1212 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 MAPK8P45983 427 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 ALDH1A3P47895 512 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 YARSP54577 528 aaKnown RBP13.13□□□□□ -0.31
LSM2-209ENST00000470083 SSRP1Q08945 709 aaKnown RBP13.13□□□□□ -0.31
LSM2-209ENST00000470083 DUSP4Q13115 394 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 ZNF423Q2M1K9 1284 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 TRIM61Q5EBN2 209 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 ATF7IP2Q5U623 682 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 RAB44Q7Z6P3 723 aaPredicted RBP13.13□□□□□ -0.31
LSM2-209ENST00000470083 DNAJB7Q7Z6W7 309 aaPredicted RBP13.13□□□□□ -0.31
LSM2-209ENST00000470083 GLIS3Q8NEA6 775 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 DEPTORQ8TB45 409 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 PIGKQ92643 395 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 PSMG2Q969U7 264 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 ZMAT2Q96NC0 199 aaKnown RBP13.13□□□□□ -0.31
LSM2-209ENST00000470083 TBC1D32Q96NH3 1257 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 PGLYRP2Q96PD5 576 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 POLR3CQ9BUI4 534 aaPredicted RBP13.13□□□□□ -0.31
LSM2-209ENST00000470083 NUSAP1Q9BXS6 441 aaKnown RBP13.13□□□□□ -0.31
LSM2-209ENST00000470083 OXCT2Q9BYC2 517 aaPredicted RBP13.13□□□□□ -0.31
LSM2-209ENST00000470083 AGXT2Q9BYV1 514 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 EBF3Q9H4W6 596 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 FBRSL1Q9HCM7 1045 aaKnown RBP13.13□□□□□ -0.31
LSM2-209ENST00000470083 CACNA2D2Q9NY47 1150 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 PCDHB8Q9UN66 801 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 INVSQ9Y283 1065 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 NAV2Q8IVL1 2488 aa13.13□□□□□ -0.31
LSM2-209ENST00000470083 ASXL3Q9C0F0 2248 aa13.12□□□□□ -0.31
LSM2-209ENST00000470083 OAZ2O95190 189 aa13.12□□□□□ -0.31
LSM2-209ENST00000470083 KCNE1P15382 129 aa13.12□□□□□ -0.31
LSM2-209ENST00000470083 ATP2B1P20020 1258 aa13.12□□□□□ -0.31
LSM2-209ENST00000470083 BCKDHBP21953 392 aa13.12□□□□□ -0.31
LSM2-209ENST00000470083 PDIA3P30101 505 aaKnown RBP13.12□□□□□ -0.31
LSM2-209ENST00000470083 NAMPTP43490 491 aa13.12□□□□□ -0.31
LSM2-209ENST00000470083 DHPSP49366 369 aaPredicted RBP13.12□□□□□ -0.31
LSM2-209ENST00000470083 CCT2P78371 535 aaKnown RBP13.12□□□□□ -0.31
LSM2-209ENST00000470083 YWHAHQ04917 246 aaPredicted RBP13.12□□□□□ -0.31
LSM2-209ENST00000470083 NT5DC1Q5TFE4 455 aa13.12□□□□□ -0.31
LSM2-209ENST00000470083 TSTD1Q8NFU3 115 aa13.12□□□□□ -0.31
LSM2-209ENST00000470083 EXOC4Q96A65 974 aa13.12□□□□□ -0.31
LSM2-209ENST00000470083 P2RY13Q9BPV8 354 aa13.12□□□□□ -0.31
LSM2-209ENST00000470083 CCDC94Q9BW85 323 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms