RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 KCNK9Q9NPC2 374 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 UBN1Q9NPG3 1134 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 RBAKQ9NYW8 714 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-209ENST00000470026 DRG1Q9Y295 367 aaKnown RBP14.47□□□□□ -0.09
BRCA1-209ENST00000470026 NUB1Q9Y5A7 615 aa14.47□□□□□ -0.09
BRCA1-209ENST00000470026 MAFBQ9Y5Q3 323 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-209ENST00000470026 LCTP09848 1927 aa14.46□□□□□ -0.09
BRCA1-209ENST00000470026 NQO1P15559 274 aaKnown RBP14.46□□□□□ -0.09
BRCA1-209ENST00000470026 CD58P19256 250 aa14.46□□□□□ -0.09
BRCA1-209ENST00000470026 TAC1P20366 129 aa14.46□□□□□ -0.09
BRCA1-209ENST00000470026 MAP2K2P36507 400 aa14.46□□□□□ -0.09
BRCA1-209ENST00000470026 BACE1P56817 501 aa14.46□□□□□ -0.09
BRCA1-209ENST00000470026 COPS2P61201 443 aa14.46□□□□□ -0.09
BRCA1-209ENST00000470026 NOP14P78316 857 aaKnown RBP14.46□□□□□ -0.09
BRCA1-209ENST00000470026 CCDC15Q0P6D6 951 aa14.46□□□□□ -0.09
BRCA1-209ENST00000470026 NEDD9Q14511 834 aa14.46□□□□□ -0.09
BRCA1-209ENST00000470026 RASA2Q15283 850 aa14.46□□□□□ -0.09
BRCA1-209ENST00000470026 MTFR1Q15390 333 aa14.46□□□□□ -0.09
BRCA1-209ENST00000470026 ANKRD35Q8N283 1001 aa14.46□□□□□ -0.09
BRCA1-209ENST00000470026 C12orf42Q96LP6 360 aa14.46□□□□□ -0.09
BRCA1-209ENST00000470026 TGS1Q96RS0 853 aaKnown RBP14.46□□□□□ -0.09
BRCA1-209ENST00000470026 RBM15Q96T37 977 aaKnown RBP eCLIP14.46□□□□□ -0.09
BRCA1-209ENST00000470026 MYCBPQ99417 103 aaPredicted RBP14.46□□□□□ -0.09
BRCA1-209ENST00000470026 RXFP1Q9HBX9 757 aa14.46□□□□□ -0.09
BRCA1-209ENST00000470026 ZNF252P-AS1Q0IIN9 211 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 SF3A3Q12874 501 aaKnown RBP eCLIP14.45□□□□□ -0.1
BRCA1-209ENST00000470026 P3H1Q32P28 736 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 MTERF2Q49AM1 385 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 EAPPQ56P03 285 aaPredicted RBP14.45□□□□□ -0.1
BRCA1-209ENST00000470026 RGS9BPQ6ZS82 235 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 ASRGL1Q7L266 308 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 TRABD2AQ86V40 505 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 PASD1Q8IV76 773 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 ALLCQ8N6M5 410 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 DENND1AQ8TEH3 1009 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 ZNF606Q8WXB4 792 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 ZBTB45Q96K62 511 aaPredicted RBP14.45□□□□□ -0.1
BRCA1-209ENST00000470026 CFAP57Q96MR6 1250 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 TTC25Q96NG3 672 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 TMEM134Q9H6X4 195 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 CYP39A1Q9NYL5 469 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 SCAF8Q9UPN6 1271 aaKnown RBP14.45□□□□□ -0.1
BRCA1-209ENST00000470026 PRPF4O43172 522 aaKnown RBP eCLIP14.45□□□□□ -0.15e-17■■■■■ 29.7
BRCA1-209ENST00000470026 STX2P32856 288 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 ICAM3P32942 547 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 CETN2P41208 172 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 SKIV2L2P42285 1042 aaKnown RBP14.45□□□□□ -0.1
BRCA1-209ENST00000470026 WDR4P57081 412 aaKnown RBP14.45□□□□□ -0.1
BRCA1-209ENST00000470026 ZBTB41Q5SVQ8 909 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 SNRNP48Q6IEG0 339 aaKnown RBP14.45□□□□□ -0.1
BRCA1-209ENST00000470026 SRRM1Q8IYB3 904 aaKnown RBP14.45□□□□□ -0.1
BRCA1-209ENST00000470026 OR5B17Q8NGF7 314 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 NKD2Q969F2 451 aaPredicted RBP14.45□□□□□ -0.1
BRCA1-209ENST00000470026 FAM118BQ9BPY3 351 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 NIFKQ9BYG3 293 aaKnown RBP14.45□□□□□ -0.1
BRCA1-209ENST00000470026 ARHGEF3Q9NR81 526 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 NKIRAS1Q9NYS0 192 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 DNPEPQ9ULA0 475 aa14.45□□□□□ -0.1
BRCA1-209ENST00000470026 IGKV6D-21A0A0A0MT36 114 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 FAM47DPA6NHR8 397 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 TJP3O95049 919 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 ASMTLO95671 621 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 LSM8O95777 96 aaKnown RBP14.44□□□□□ -0.1
BRCA1-209ENST00000470026 OATP04181 439 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 FOXN2P32314 431 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 CDH5P33151 784 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-209ENST00000470026 POLGP54098 1239 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-209ENST00000470026 RPL7AP62424 266 aaKnown RBP14.44□□□□□ -0.1
BRCA1-209ENST00000470026 MGAT5Q09328 741 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 GRM1Q13255 1194 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 OASLQ15646 514 aaKnown RBP14.44□□□□□ -0.1
BRCA1-209ENST00000470026 GNPTABQ3T906 1256 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 PPP1R15BQ5SWA1 713 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 CIAPIN1Q6FI81 312 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 MFSD7Q6UXD7 560 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 TBC1D1Q86TI0 1168 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-209ENST00000470026 PRUNE1Q86TP1 453 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 FITM2Q8N6M3 262 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 NIPA2Q8N8Q9 360 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 ANKLE1Q8NAG6 615 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 GLIS1Q8NBF1 620 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 GDAP1Q8TB36 358 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 FHDC1Q9C0D6 1143 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-209ENST00000470026 ECT2Q9H8V3 914 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 PPCSQ9HAB8 311 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 MLXIPLQ9NP71 852 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 ZNF112Q9UJU3 913 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 RASA4BC9J798 803 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 K7ERI5 159 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 ALOX15BO15296 676 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 RASA4O43374 803 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 ASS1P00966 412 aaKnown RBP14.44□□□□□ -0.1
BRCA1-209ENST00000470026 EDN1P05305 212 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 CALB1P05937 261 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 CCNB1P14635 433 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 TCF4P15884 667 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 AP3M2P53677 418 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 KCNJ2P63252 427 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 SP2Q02086 613 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 NCOA4Q13772 614 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms