RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 RPS6KA1Q15418 735 aa19.33■□□□□ 0.69
SMC4-211ENST00000469858 CREG2Q8IUH2 290 aa19.33■□□□□ 0.69
SMC4-211ENST00000469858 ARRDC4Q8NCT1 418 aa19.33■□□□□ 0.69
SMC4-211ENST00000469858 SH3TC2Q8TF17 1288 aa19.33■□□□□ 0.69
SMC4-211ENST00000469858 NUP85Q9BW27 656 aa19.33■□□□□ 0.69
SMC4-211ENST00000469858 OSBPL7Q9BZF2 842 aa19.33■□□□□ 0.69
SMC4-211ENST00000469858 AGO3Q9H9G7 860 aaKnown RBP19.33■□□□□ 0.69
SMC4-211ENST00000469858 CNOT8Q9UFF9 292 aaKnown RBP19.33■□□□□ 0.69
SMC4-211ENST00000469858 PDE2AO00408 941 aaPredicted RBP19.33■□□□□ 0.68
SMC4-211ENST00000469858 GPR182O15218 404 aa19.33■□□□□ 0.68
SMC4-211ENST00000469858 TLR3O15455 904 aaKnown RBP19.33■□□□□ 0.68
SMC4-211ENST00000469858 KIF4AO95239 1232 aa19.33■□□□□ 0.68
SMC4-211ENST00000469858 GHRP10912 638 aa19.33■□□□□ 0.68
SMC4-211ENST00000469858 PTPN11Q06124 597 aaPredicted RBP19.33■□□□□ 0.68
SMC4-211ENST00000469858 ORC1Q13415 861 aa19.33■□□□□ 0.68
SMC4-211ENST00000469858 TCEAL1Q15170 157 aa19.33■□□□□ 0.68
SMC4-211ENST00000469858 NT5DC3Q86UY8 548 aa19.33■□□□□ 0.68
SMC4-211ENST00000469858 MCOLN2Q8IZK6 566 aa19.33■□□□□ 0.68
SMC4-211ENST00000469858 ZSWIM1Q9BR11 485 aa19.33■□□□□ 0.68
SMC4-211ENST00000469858 TSEN34Q9BSV6 310 aaKnown RBP19.33■□□□□ 0.68
SMC4-211ENST00000469858 CYP3A43Q9HB55 503 aa19.33■□□□□ 0.68
SMC4-211ENST00000469858 HMGXB4Q9UGU5 601 aa19.33■□□□□ 0.68
SMC4-211ENST00000469858 A0A1W2PQ45 241 aaPredicted RBP19.32■□□□□ 0.68
SMC4-211ENST00000469858 A0A1W2PQY0 241 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 CD19P15391 556 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 C2CD6Q53TS8 623 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 ZNF564Q8TBZ8 553 aaPredicted RBP19.32■□□□□ 0.68
SMC4-211ENST00000469858 TFAP2BQ92481 460 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 FAM105AQ9NUU6 356 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 AMFRQ9UKV5 643 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 CILPO75339 1184 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 KCNE1P15382 129 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 CD52P31358 61 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 RAD23BP54727 409 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 XKR4Q5GH76 650 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 FBXO47Q5MNV8 452 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 CCDC181Q5TID7 509 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 C9orf57Q5W0N0 161 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 MON1BQ7L1V2 547 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 ANKRD7Q92527 254 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 TWNKQ96RR1 684 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 C11orf70Q9BRQ4 267 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 ABCB6Q9NP58 842 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 STARD7Q9NQZ5 370 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 CHST12Q9NRB3 414 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 SMARCAL1Q9NZC9 954 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 EHD2Q9NZN4 543 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 STXBP5LQ9Y2K9 1186 aa19.32■□□□□ 0.68
SMC4-211ENST00000469858 TMEM110-MUSTN1A8MSY1 372 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 KCNK3O14649 394 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 XPOTO43592 962 aaKnown RBP19.31■□□□□ 0.68
SMC4-211ENST00000469858 MTA2O94776 668 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 PAK2Q13177 524 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 TRIM71Q2Q1W2 868 aaKnown RBP19.31■□□□□ 0.68
SMC4-211ENST00000469858 PHLDB2Q86SQ0 1253 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 LRRC52Q8N7C0 313 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 WHAMMQ8TF30 809 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 TRIM11Q96F44 468 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 CALR3Q96L12 384 aaKnown RBP19.31■□□□□ 0.68
SMC4-211ENST00000469858 ELOVL4Q9GZR5 314 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.31■□□□□ 0.681e-147■■■■■ 345.5
SMC4-211ENST00000469858 EPC1Q9H2F5 836 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 ERVK-5Q9HDB9 667 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 UVRAGQ9P2Y5 699 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 PADI3Q9ULW8 664 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 SNX9Q9Y5X1 595 aa19.31■□□□□ 0.68
SMC4-211ENST00000469858 MEIS3P2A8K0S8 358 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 CD4P01730 458 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 PAEPP09466 180 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 MYBL1P10243 752 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 ZSCAN20P17040 1043 aaPredicted RBP19.3■□□□□ 0.68
SMC4-211ENST00000469858 RRM1P23921 792 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 MESDQ14696 234 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 SMYD5Q6GMV2 418 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 SLC4A11Q8NBS3 891 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 NOA1Q8NC60 698 aaKnown RBP19.3■□□□□ 0.68
SMC4-211ENST00000469858 RABGGTAQ92696 567 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 MS4A14Q96JA4 679 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 ZFP42Q96MM3 310 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 TRPV6Q9H1D0 765 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 GOLGA2P5Q9HBQ8 144 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 ADAM22Q9P0K1 906 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 MYCP01106 439 aaPredicted RBP19.3■□□□□ 0.68
SMC4-211ENST00000469858 RBM10P98175 930 aaKnown RBP19.3■□□□□ 0.68
SMC4-211ENST00000469858 SOX4Q06945 474 aaPredicted RBP19.3■□□□□ 0.68
SMC4-211ENST00000469858 LPIN1Q14693 890 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 ZNF618Q5T7W0 954 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 C11orf63Q6NUN7 778 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 LLGL2Q6P1M3 1020 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 MMS22LQ6ZRQ5 1243 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 PHF13Q86YI8 300 aaPredicted RBP19.3■□□□□ 0.68
SMC4-211ENST00000469858 HACE1Q8IYU2 909 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 C1orf131Q8NDD1 294 aaKnown RBP19.3■□□□□ 0.68
SMC4-211ENST00000469858 TMEM176AQ96HP8 235 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 BTBD6Q96KE9 485 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 TSPAN18Q96SJ8 248 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 BEGAINQ9BUH8 593 aa19.3■□□□□ 0.68
SMC4-211ENST00000469858 BARX2Q9UMQ3 279 aaPredicted RBP19.3■□□□□ 0.68
SMC4-211ENST00000469858 LSM8O95777 96 aaKnown RBP19.29■□□□□ 0.68
SMC4-211ENST00000469858 ITGA4P13612 1032 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms