RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 ASTE1Q2TB18 679 aaPredicted RBP11.12□□□□□ -0.63
THBS3-206ENST00000469769 TIGD5Q53EQ6 642 aa11.12□□□□□ -0.63
THBS3-206ENST00000469769 HERC6Q8IVU3 1022 aa11.12□□□□□ -0.63
THBS3-206ENST00000469769 RNF168Q8IYW5 571 aaPredicted RBP11.12□□□□□ -0.63
THBS3-206ENST00000469769 OLIG1Q8TAK6 271 aa11.12□□□□□ -0.63
THBS3-206ENST00000469769 WHAMMQ8TF30 809 aa11.12□□□□□ -0.63
THBS3-206ENST00000469769 CLP1Q92989 425 aaKnown RBP11.12□□□□□ -0.63
THBS3-206ENST00000469769 SENP8Q96LD8 212 aa11.12□□□□□ -0.63
THBS3-206ENST00000469769 FAM193BQ96PV7 902 aaPredicted RBP11.12□□□□□ -0.63
THBS3-206ENST00000469769 SPAG5Q96R06 1193 aa11.12□□□□□ -0.63
THBS3-206ENST00000469769 MTIF3Q9H2K0 278 aaKnown RBP11.12□□□□□ -0.63
THBS3-206ENST00000469769 CISHQ9NSE2 258 aa11.12□□□□□ -0.63
THBS3-206ENST00000469769 MARCH5Q9NX47 278 aa11.12□□□□□ -0.63
THBS3-206ENST00000469769 CACNG4Q9UBN1 327 aa11.12□□□□□ -0.63
THBS3-206ENST00000469769 DNAJB4Q9UDY4 337 aa11.12□□□□□ -0.63
THBS3-206ENST00000469769 BARX2Q9UMQ3 279 aaPredicted RBP11.12□□□□□ -0.63
THBS3-206ENST00000469769 POLIQ9UNA4 740 aa11.12□□□□□ -0.63
THBS3-206ENST00000469769 R3HCC1Q9Y3T6 440 aaKnown RBP11.12□□□□□ -0.63
THBS3-206ENST00000469769 INSL6Q9Y581 213 aa11.12□□□□□ -0.63
THBS3-206ENST00000469769 BZW2Q9Y6E2 419 aaKnown RBP11.12□□□□□ -0.63
THBS3-206ENST00000469769 CEP290O15078 2479 aa11.12□□□□□ -0.63
THBS3-206ENST00000469769 VWA8A3KMH1 1905 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 SSU72P8A0A1W2PR75 194 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 CILPO75339 1184 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 UPP2O95045 317 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 KIF4AO95239 1232 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 SERPING1P05155 500 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 ITGB1P05556 798 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 WEE2P0C1S8 567 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 CCDC172P0C7W6 258 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 FERP16591 822 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 TYMPP19971 482 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 WARSP23381 471 aaKnown RBP11.11□□□□□ -0.63
THBS3-206ENST00000469769 ANXA13P27216 316 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 BMP8BP34820 402 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 CLCN1P35523 988 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 SLC11A1P49279 550 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 CDH8P55286 799 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 BCAR1P56945 870 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 YWHAEP62258 255 aaKnown RBP11.11□□□□□ -0.63
THBS3-206ENST00000469769 TNNC1P63316 161 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 CCZ1BP86790 482 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 CCZ1P86791 482 aaPredicted RBP11.11□□□□□ -0.63
THBS3-206ENST00000469769 RNASELQ05823 741 aaKnown RBP11.11□□□□□ -0.63
THBS3-206ENST00000469769 GOLGA8FQ08AF8 430 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 GOLGA8DPQ0D2H9 430 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 RAPGEF1Q13905 1077 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 ARHGAP44Q17R89 818 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 SFMBT2Q5VUG0 894 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 UNC93AQ86WB7 457 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 CRYBG2Q8N1P7 616 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 TMEM86AQ8N2M4 240 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 CCDC112Q8NEF3 446 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 KBTBD7Q8WVZ9 684 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 DDX1Q92499 740 aaKnown RBP11.11□□□□□ -0.63
THBS3-206ENST00000469769 RAD9AQ99638 391 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 COLEC11Q9BWP8 271 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 SMYD3Q9H7B4 428 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 ARHGAP20Q9P2F6 1191 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 HCSTQ9UBK5 93 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 NXF1Q9UBU9 619 aaKnown RBP11.11□□□□□ -0.63
THBS3-206ENST00000469769 FAN1Q9Y2M0 1017 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 NME7Q9Y5B8 376 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 SNX9Q9Y5X1 595 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 SLC4A7Q9Y6M7 1214 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 TSC2P49815 1807 aa11.11□□□□□ -0.63
THBS3-206ENST00000469769 KIAA1671Q9BY89 1806 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 ARHGEF37A1IGU5 675 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 TULP1O00294 542 aaPredicted RBP11.1□□□□□ -0.63
THBS3-206ENST00000469769 CYB561D2O14569 222 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 SYN3O14994 580 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 GFPT2O94808 682 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 PAEPP09466 180 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 IBSPP21815 317 aaPredicted RBP11.1□□□□□ -0.63
THBS3-206ENST00000469769 OR1G1P47890 313 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 RAD23BP54727 409 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 BPIFB4P59827 614 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 MRPL58Q14197 206 aaKnown RBP11.1□□□□□ -0.63
THBS3-206ENST00000469769 TMCO2Q7Z6W1 182 aaPredicted RBP11.1□□□□□ -0.63
THBS3-206ENST00000469769 TMTC1Q8IUR5 882 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 GPR65Q8IYL9 337 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 PDCL2Q8N4E4 241 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 APPL2Q8NEU8 664 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 EPS8L1Q8TE68 723 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 CHP1Q99653 195 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 BAG1Q99933 345 aaPredicted RBP11.1□□□□□ -0.63
THBS3-206ENST00000469769 MRPL45Q9BRJ2 306 aaKnown RBP11.1□□□□□ -0.63
THBS3-206ENST00000469769 KCNF1Q9H3M0 494 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.1□□□□□ -0.63
THBS3-206ENST00000469769 NOCTQ9UK39 431 aaKnown RBP11.1□□□□□ -0.63
THBS3-206ENST00000469769 ADAM28Q9UKQ2 775 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 DSEQ9UL01 958 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 PCDHB8Q9UN66 801 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 L1RE1Q9UN81 338 aa11.1□□□□□ -0.63
THBS3-206ENST00000469769 MRPL42Q9Y6G3 142 aaKnown RBP11.1□□□□□ -0.63
THBS3-206ENST00000469769 ZBBXA8MT70 800 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 F8W810 466 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 CYP26A1O43174 497 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 TRAPPC3O43617 180 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 HUS1O60921 280 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms