RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 NPR1P16066 1061 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 OASLQ15646 514 aaKnown RBP10.88□□□□□ -0.67
SMC4-210ENST00000469762 MSS51Q4VC12 460 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 KHDC1Q4VXA5 237 aaKnown RBP10.88□□□□□ -0.67
SMC4-210ENST00000469762 FAM102BQ5T8I3 360 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 CAPN12Q6ZSI9 719 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 ZNF365Q70YC5 407 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 NLRX1Q86UT6 975 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 VSIG1Q86XK7 387 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 RHOT1Q8IXI2 618 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 C4orf19Q8IY42 314 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 EXD1Q8NHP7 514 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 RFWD2Q8NHY2 731 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 NRG4Q8WWG1 115 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 ZNF75CPQ92670 426 aaPredicted RBP10.88□□□□□ -0.67
SMC4-210ENST00000469762 KIFAP3Q92845 792 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 PTPRN2Q92932 1015 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 FAM136AQ96C01 138 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 RAB3IPQ96QF0 476 aaPredicted RBP10.88□□□□□ -0.67
SMC4-210ENST00000469762 NTPCRQ9BSD7 190 aaKnown RBP10.88□□□□□ -0.67
SMC4-210ENST00000469762 HAPLN2Q9GZV7 340 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 PCDHB2Q9Y5E7 798 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 TCRBV5S1A1TA0A578 114 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 ALOX15BO15296 676 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 PTGER2P43116 358 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 PTDSS1P48651 473 aaKnown RBP10.88□□□□□ -0.67
SMC4-210ENST00000469762 RAD23BP54727 409 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 OGDHQ02218 1023 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
SMC4-210ENST00000469762 MFSD7Q6UXD7 560 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 ALLCQ8N6M5 410 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 SYT15Q9BQS2 421 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.88□□□□□ -0.674e-34■■■■■ 131.8
SMC4-210ENST00000469762 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 SPDYE5A6NIY4 337 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 GTF2H1P32780 548 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 NOP14P78316 857 aaKnown RBP10.88□□□□□ -0.67
SMC4-210ENST00000469762 NFX1Q12986 1120 aaKnown RBP10.88□□□□□ -0.67
SMC4-210ENST00000469762 SPARCL1Q14515 664 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 TDRD10Q5VZ19 366 aaKnown RBP10.88□□□□□ -0.67
SMC4-210ENST00000469762 DSTYKQ6XUX3 929 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 CLNKQ7Z7G1 428 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 MASTLQ96GX5 879 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 SLITRK1Q96PX8 696 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 RABGEF1Q9UJ41 708 aa10.88□□□□□ -0.67
SMC4-210ENST00000469762 ZNF541Q9H0D2 1346 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 CMPK2Q5EBM0 449 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 FAM81BQ96LP2 452 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 NUDCD1Q96RS6 583 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 DHRS4Q9BTZ2 278 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 OSBPL1AQ9BXW6 950 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 CADM1Q9BY67 442 aaKnown RBP10.87□□□□□ -0.67
SMC4-210ENST00000469762 KCNK13Q9HB14 408 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 ZFATQ9P243 1243 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 LNPEPQ9UIQ6 1025 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 CNTNAP1P78357 1384 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 C2CD2LO14523 706 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 ZNF862O60290 1169 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 PLA2G6O60733 806 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 C4BPAP04003 597 aaKnown RBP10.87□□□□□ -0.67
SMC4-210ENST00000469762 MYBL1P10243 752 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 ATP6V1C1P21283 382 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 ADRA1DP25100 572 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 GJC1P36383 396 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 DRICH1Q6PGQ1 229 aaPredicted RBP10.87□□□□□ -0.67
SMC4-210ENST00000469762 NIPA1Q7RTP0 329 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 MTDHQ86UE4 582 aaKnown RBP10.87□□□□□ -0.67
SMC4-210ENST00000469762 CCDC125Q86Z20 511 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 BBOF1Q8ND07 529 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 PHC3Q8NDX5 983 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 ACSF2Q96CM8 615 aaPredicted RBP10.87□□□□□ -0.67
SMC4-210ENST00000469762 PTCD3Q96EY7 689 aaKnown RBP10.87□□□□□ -0.67
SMC4-210ENST00000469762 CFAP57Q96MR6 1250 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 FARP1Q9Y4F1 1045 aaPredicted RBP10.87□□□□□ -0.67
SMC4-210ENST00000469762 H0Y3Z8 333 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 ATP5HO75947 161 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 RXRBP28702 533 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 GCKP35557 465 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 CAP2P40123 477 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 ARSEP51690 589 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 GHRHRQ02643 423 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 EFHC2Q5JST6 749 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 ANKRD22Q5VYY1 191 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 KAZNQ674X7 775 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 TRIM68Q6AZZ1 485 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 LVRNQ6Q4G3 990 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 NLRP9Q7RTR0 991 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.87□□□□□ -0.675e-13■■■■■ 220.5
SMC4-210ENST00000469762 MRRFQ96E11 262 aaKnown RBP10.87□□□□□ -0.67
SMC4-210ENST00000469762 FAM213AQ9BRX8 229 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 C10orf88Q9H8K7 445 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 PDLIM7Q9NR12 457 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.87□□□□□ -0.675e-7■■■■□ 23.7
SMC4-210ENST00000469762 USTQ9Y2C2 406 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.87□□□□□ -0.675e-47■■■■■ 274.1
SMC4-210ENST00000469762 IVNS1ABPQ9Y6Y0 642 aa10.87□□□□□ -0.67
SMC4-210ENST00000469762 FER1L6Q2WGJ9 1857 aa10.86□□□□□ -0.67
SMC4-210ENST00000469762 YDJCA8MPS7 323 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms