RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 SOCS7O14512 581 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 TOM1L1O75674 476 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 KIAA0754O94854 1291 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 MYBL1P10243 752 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 CETPP11597 493 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 MMP8P22894 467 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 IGBP1P78318 339 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 ZNF568Q3ZCX4 644 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 TTC31Q49AM3 519 aaPredicted RBP20.25■□□□□ 0.83
VIM-203ENST00000469543 EEF1DP3Q658K8 133 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 GPAT2Q6NUI2 795 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 MFSD7Q6UXD7 560 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 RIOX2Q8IUF8 465 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 ATL2Q8NHH9 583 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 ATXN2LQ8WWM7 1075 aaKnown RBP20.25■□□□□ 0.83
VIM-203ENST00000469543 SNF8Q96H20 258 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 ACO2Q99798 780 aaKnown RBP20.25■□□□□ 0.83
VIM-203ENST00000469543 ANAPC5Q9UJX4 755 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 DNPEPQ9ULA0 475 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 INO80B-WBP1J3KQ70 363 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 EDNRBP24530 442 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 CLCN3P51790 818 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 KCNT1Q5JUK3 1230 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 SPDYCQ5MJ68 293 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 C6orf118Q5T5N4 469 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 METTL7BQ6UX53 244 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 GSTA5Q7RTV2 222 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 PHF13Q86YI8 300 aaPredicted RBP20.25■□□□□ 0.83
VIM-203ENST00000469543 TAB3Q8N5C8 712 aaPredicted RBP20.25■□□□□ 0.83
VIM-203ENST00000469543 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.25■□□□□ 0.83
VIM-203ENST00000469543 CABS1Q96KC9 395 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 FAM81BQ96LP2 452 aa20.25■□□□□ 0.83
VIM-203ENST00000469543 INO80BQ9C086 356 aaPredicted RBP20.25■□□□□ 0.83
VIM-203ENST00000469543 ASCC2Q9H1I8 757 aaPredicted RBP20.25■□□□□ 0.83
VIM-203ENST00000469543 KRT19P08727 400 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 SMTNL2Q2TAL5 461 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 NOL9Q5SY16 702 aaKnown RBP20.24■□□□□ 0.83
VIM-203ENST00000469543 BRSK2Q8IWQ3 736 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 FGD4Q96M96 766 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 GPR20Q99678 358 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 TSPYL1Q9H0U9 437 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 TMEM134Q9H6X4 195 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 NEU2Q9Y3R4 380 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 MCM3APO60318 1980 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 NOP56O00567 594 aaKnown RBP20.24■□□□□ 0.83
VIM-203ENST00000469543 PRKCBP05771 671 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 ATF2P15336 505 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 ITIH2P19823 946 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 DRD4P21917 467 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 IRX3P78415 501 aaPredicted RBP20.24■□□□□ 0.83
VIM-203ENST00000469543 NEDD9Q14511 834 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 IPO4Q8TEX9 1081 aaKnown RBP20.24■□□□□ 0.83
VIM-203ENST00000469543 IMPG2Q9BZV3 1241 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 MRPL47Q9HD33 250 aaKnown RBP20.24■□□□□ 0.83
VIM-203ENST00000469543 PARVAQ9NVD7 372 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 WHRNQ9P202 907 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 CNTN6Q9UQ52 1028 aa20.24■□□□□ 0.83
VIM-203ENST00000469543 DNM1LO00429 736 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 ABLIM1O14639 778 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 PIAS1O75925 651 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 NFX1Q12986 1120 aaKnown RBP20.23■□□□□ 0.83
VIM-203ENST00000469543 CAPN12Q6ZSI9 719 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 SLCO2A1Q92959 643 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 CHMP6Q96FZ7 201 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 ZNF317Q96PQ6 595 aaPredicted RBP20.23■□□□□ 0.83
VIM-203ENST00000469543 INTS9Q9NV88 658 aaKnown RBP20.23■□□□□ 0.83
VIM-203ENST00000469543 TMEM191CA6NGB0 347 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 GOLGA8SH3BPF8 625 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 CNMDO75829 334 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 GH1P01241 217 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 PAEPP09466 180 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 TMEM191BP0C7N4 346 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 TBXAS1P24557 533 aaPredicted RBP20.23■□□□□ 0.83
VIM-203ENST00000469543 RFC5P40937 340 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 ZNF132P52740 706 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 PTK6Q13882 451 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 MPP2Q14168 576 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 MAPK6Q16659 721 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 TMEM132AQ24JP5 1023 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 P3H1Q32P28 736 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 CYP4F22Q6NT55 531 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 LRRC34Q8IZ02 419 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 GPC2Q8N158 579 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 TRIM11Q96F44 468 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 SGIP1Q9BQI5 828 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 MRPL4Q9BYD3 311 aaKnown RBP20.23■□□□□ 0.83
VIM-203ENST00000469543 FAM129AQ9BZQ8 928 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 RNPEPQ9H4A4 650 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 CYTH4Q9UIA0 394 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 GGT7Q9UJ14 662 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 CSADQ9Y600 493 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 LTBP3Q9NS15 1303 aa20.23■□□□□ 0.83
VIM-203ENST00000469543 GAS8O95995 478 aa20.22■□□□□ 0.83
VIM-203ENST00000469543 CXCL8P10145 99 aa20.22■□□□□ 0.83
VIM-203ENST00000469543 DCUN1D2Q6PH85 259 aa20.22■□□□□ 0.83
VIM-203ENST00000469543 ZNF365Q70YC5 407 aa20.22■□□□□ 0.83
VIM-203ENST00000469543 SPATA33Q96N06 139 aa20.22■□□□□ 0.83
VIM-203ENST00000469543 EVPLQ92817 2033 aa20.22■□□□□ 0.83
VIM-203ENST00000469543 TTC4O95801 387 aa20.22■□□□□ 0.83
VIM-203ENST00000469543 HOXC6P09630 235 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms