RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 COPS7BQ9H9Q2 264 aaPredicted RBP7.39□□□□□ -1.23
CD46-212ENST00000469535 MYPNQ86TC9 1320 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 FAM47E-STBD1D6RA91 191 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 NTSR2O95665 410 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 ACO1P21399 889 aaKnown RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 CAP2P40123 477 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 RGS4P49798 205 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 EFEMP1Q12805 493 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 MAPRE1Q15691 268 aaKnown RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 KHDRBS2Q5VWX1 349 aaKnown RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 IZUMO3Q5VZ72 239 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 ARL8AQ96BM9 186 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 SPACA7Q96KW9 195 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 PANX2Q96RD6 677 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 CCDC3Q9BQI4 270 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 TUBB6Q9BUF5 446 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 ADAM33Q9BZ11 813 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 WNT8AQ9H1J5 351 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 MED4Q9NPJ6 270 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 SPASTQ9UBP0 616 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 FZD1Q9UP38 647 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 A0A087WUV0 522 aaPredicted RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 LMNAP02545 664 aaKnown RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 BRD2P25440 801 aaKnown RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 PNPLA4P41247 253 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 ZSCAN26Q16670 478 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 HIST2H2ACQ16777 129 aaPredicted RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 SMTNL2Q2TAL5 461 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 HIST2H2AA3Q6FI13 130 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 WDCPQ9H6R7 721 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 BCL2L12Q9HB09 334 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 NDOR1Q9UHB4 597 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 DCTN4Q9UJW0 460 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 PNPLA7Q6ZV29 1317 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 HLA-DRAP01903 254 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 BRAFP15056 766 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 BTKQ06187 659 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 USP10Q14694 798 aaKnown RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 SNCBQ16143 134 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 PTGISQ16647 500 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 PPM1LQ5SGD2 360 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 NUP93Q8N1F7 819 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 MTG1Q9BT17 334 aaPredicted RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 TARS2Q9BW92 718 aaKnown RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 ATXN3LQ9H3M9 355 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 C20orf96Q9NUD7 363 aaPredicted RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 UBQLN1Q9UMX0 589 aaKnown RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 P4HA2O15460 535 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 DYRK3O43781 588 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 NDUFS2O75306 463 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 RHOBTB1O94844 696 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 GTF2H1P32780 548 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 BACE1P56817 501 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 TJAP1Q5JTD0 557 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 RGS9BPQ6ZS82 235 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 ZNF438Q7Z4V0 828 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 ACER1Q8TDN7 264 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 SNF8Q96H20 258 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 CNOT10Q9H9A5 744 aaKnown RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 ALG13Q9NP73 1137 aaKnown RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 WARS2Q9UGM6 360 aaKnown RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 VPS28Q9UK41 221 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 RTN2O75298 545 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 RPSAP08865 295 aaKnown RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 ALOX15P16050 662 aaPredicted RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 TP53BP2Q13625 1128 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 C6orf10Q5SRN2 563 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 ITIH5Q86UX2 942 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 BLOC1S5Q8TDH9 187 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 RIN2Q8WYP3 895 aaPredicted RBP7.38□□□□□ -1.23
CD46-212ENST00000469535 TMEM117Q9H0C3 514 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 OLFML3Q9NRN5 406 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 ABHD10Q9NUJ1 306 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 PSD3Q9NYI0 1048 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 CNTNAP4Q9C0A0 1308 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 KLRK1P26718 216 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 PDIA6Q15084 440 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 ALX1Q15699 326 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 DEFB115Q30KQ5 88 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 RABGAP1LQ5R372 815 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 KCTD17Q8N5Z5 321 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 FBXO41Q8TF61 875 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 PNMA5Q96PV4 448 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 OSMRQ99650 979 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 SETD4Q9NVD3 440 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 THEGQ9P2T0 379 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 ANGPTL2Q9UKU9 493 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 SPACA6W5XKT8 324 aa7.38□□□□□ -1.23
CD46-212ENST00000469535 SLC12A8A0AV02 714 aa7.37□□□□□ -1.23
CD46-212ENST00000469535 M0QYT0 321 aa7.37□□□□□ -1.23
CD46-212ENST00000469535 THP07101 528 aa7.37□□□□□ -1.23
CD46-212ENST00000469535 CYP2C8P10632 490 aa7.37□□□□□ -1.23
CD46-212ENST00000469535 MAP3K7CLP57077 242 aa7.37□□□□□ -1.23
CD46-212ENST00000469535 CCDC137Q6PK04 289 aaKnown RBP7.37□□□□□ -1.23
CD46-212ENST00000469535 FRMD5Q7Z6J6 570 aa7.37□□□□□ -1.23
CD46-212ENST00000469535 SKA1Q96BD8 255 aa7.37□□□□□ -1.23
CD46-212ENST00000469535 SMAD5Q99717 465 aaKnown RBP7.37□□□□□ -1.23
CD46-212ENST00000469535 SENP2Q9HC62 589 aa7.37□□□□□ -1.23
CD46-212ENST00000469535 GUCA1CO95843 209 aa7.37□□□□□ -1.23
CD46-212ENST00000469535 GHRP10912 638 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms