RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 GPRC5DQ9NZD1 345 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 ZNF112Q9UJU3 913 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 CNTNAP2Q9UHC6 1331 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 ADCY3O60266 1144 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 CYP1A1P04798 512 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-221ENST00000469415 PRKCBP05771 671 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 FNTAP49354 379 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 LAMTOR4Q0VGL1 99 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 SLMAPQ14BN4 828 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 WDR72Q3MJ13 1102 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 DNAJC24Q6P3W2 148 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 ENOSF1Q7L5Y1 443 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 APOBEC3FQ8IUX4 373 aaKnown RBP18.91■□□□□ 0.62
MCF2L-221ENST00000469415 CGRRF1Q99675 332 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 TXNRD2Q9NNW7 524 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 CSADQ9Y600 493 aa18.91■□□□□ 0.62
MCF2L-221ENST00000469415 MAP3K6O95382 1288 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 NUDT17P0C025 328 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 CXCL8P10145 99 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 CETPP11597 493 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 DRG2P55039 364 aaKnown RBP18.9■□□□□ 0.62
MCF2L-221ENST00000469415 FASTKD3Q14CZ7 662 aaKnown RBP18.9■□□□□ 0.62
MCF2L-221ENST00000469415 C6orf118Q5T5N4 469 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 SLFN12LQ6IEE8 588 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 FEZF2Q8TBJ5 459 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 SLC16A10Q8TF71 515 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 TMEM121Q9BTD3 319 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 SPATC1LQ9H0A9 340 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 ADAMTS5Q9UNA0 930 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 SNCAIPQ9Y6H5 919 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 MYH9P35579 1960 aaKnown RBP18.9■□□□□ 0.62
MCF2L-221ENST00000469415 TMEM120BA0PK00 339 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 DNM1LO00429 736 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 PMM2O15305 246 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 SPAG7O75391 227 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 ZNF568Q3ZCX4 644 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 ATL2Q8NHH9 583 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 SEPT1Q8WYJ6 367 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 SPATA33Q96N06 139 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 KIAA1586Q9HCI6 787 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 NFASCO94856 1347 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 MNAT1P51948 309 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 LACTBP83111 547 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-221ENST00000469415 NFX1Q12986 1120 aaKnown RBP18.9■□□□□ 0.62
MCF2L-221ENST00000469415 MAPK6Q16659 721 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 CYP1B1Q16678 543 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 ZNF699Q32M78 642 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 MORC4Q8TE76 937 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 MINDY3Q9H8M7 445 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 SAYSD1Q9NPB0 183 aa18.9■□□□□ 0.62
MCF2L-221ENST00000469415 DRD4P21917 467 aa18.89■□□□□ 0.61
MCF2L-221ENST00000469415 GPS1Q13098 491 aa18.89■□□□□ 0.61
MCF2L-221ENST00000469415 TMED2Q15363 201 aa18.89■□□□□ 0.61
MCF2L-221ENST00000469415 CLUL1Q15846 466 aa18.89■□□□□ 0.61
MCF2L-221ENST00000469415 ERMARDQ5T6L9 678 aa18.89■□□□□ 0.61
MCF2L-221ENST00000469415 ANKMY2Q8IV38 441 aa18.89■□□□□ 0.61
MCF2L-221ENST00000469415 CCDC13Q8IYE1 715 aa18.89■□□□□ 0.61
MCF2L-221ENST00000469415 FGFR1OP2Q9NVK5 253 aa18.89■□□□□ 0.61
MCF2L-221ENST00000469415 KIF13BQ9NQT8 1826 aa18.89■□□□□ 0.61
MCF2L-221ENST00000469415 GRAP2O75791 330 aa18.89■□□□□ 0.61
MCF2L-221ENST00000469415 OAZ1P54368 228 aa18.89■□□□□ 0.61
MCF2L-221ENST00000469415 GAD2Q05329 585 aa18.89■□□□□ 0.61
MCF2L-221ENST00000469415 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.89■□□□□ 0.61
MCF2L-221ENST00000469415 MRPL47Q9HD33 250 aaKnown RBP18.89■□□□□ 0.61
MCF2L-221ENST00000469415 NINJ2Q9NZG7 142 aa18.89■□□□□ 0.61
MCF2L-221ENST00000469415 TCP11X1B4DZS4 312 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 H0YCG3 227 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 IVDP26440 423 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 ARSEP51690 589 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 LBX2Q6XYB7 198 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 ERICH1Q86X53 443 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 FAM129AQ9BZQ8 928 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 AGTPBP1Q9UPW5 1226 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 SGK1O00141 431 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 DENND1BQ6P3S1 775 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 FAM47EQ6ZV65 393 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 CPB2Q96IY4 423 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 RBM15Q96T37 977 aaKnown RBP eCLIP18.88■□□□□ 0.618e-6■■■■■ 30.1
MCF2L-221ENST00000469415 VPS37BQ9H9H4 285 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 KIF9Q9HAQ2 790 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 HAUS2Q9NVX0 235 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 FER1L6Q2WGJ9 1857 aa18.88■□□□□ 0.61
MCF2L-221ENST00000469415 BRAFP15056 766 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 HNRNPH1P31943 449 aaKnown RBP18.87■□□□□ 0.61
MCF2L-221ENST00000469415 ZNF252P-AS1Q0IIN9 211 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 MPP2Q14168 576 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 NUGGCQ68CJ6 796 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 JOSD2Q8TAC2 188 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 MRPL4Q9BYD3 311 aaKnown RBP18.87■□□□□ 0.61
MCF2L-221ENST00000469415 PARVAQ9NVD7 372 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 HMGXB4Q9UGU5 601 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 MSCO60682 206 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 ZC3H11AO75152 810 aaKnown RBP eCLIP18.87■□□□□ 0.61
MCF2L-221ENST00000469415 LDHAP00338 332 aaKnown RBP18.87■□□□□ 0.61
MCF2L-221ENST00000469415 RFC1P35251 1148 aaPredicted RBP18.87■□□□□ 0.61
MCF2L-221ENST00000469415 MMP13P45452 471 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 RTP1P59025 263 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 TAF5Q15542 800 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 DUOXA2Q1HG44 320 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 GPATCH11Q8N954 259 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms