RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 HOXA11P31270 313 aaPredicted RBP9.95□□□□□ -0.82
SMC1A-205ENST00000469129 CXCR5P32302 372 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 PNPLA4P41247 253 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 DNA2P51530 1060 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 CLCN6P51797 869 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 PRMT2P55345 433 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 TAP1Q03518 808 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 CACNB2Q08289 660 aaPredicted RBP9.95□□□□□ -0.82
SMC1A-205ENST00000469129 C2orf54Q08AI8 447 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 STILQ15468 1287 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 PPP2R5EQ16537 467 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 NBPF20Q3BBV1 942 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 WDR72Q3MJ13 1102 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 FAM47CQ5HY64 1035 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 SEL1L2Q5TEA6 688 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 NAA35Q5VZE5 725 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 C8orf74Q6P047 294 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 RPAINQ86UA6 219 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 DNAAF5Q86Y56 855 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 RASGEF1CQ8N431 466 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 USP38Q8NB14 1042 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 NOA1Q8NC60 698 aaKnown RBP9.95□□□□□ -0.82
SMC1A-205ENST00000469129 TMEM35BQ8NCS4 154 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 HNRNPLLQ8WVV9 542 aaKnown RBP9.95□□□□□ -0.82
SMC1A-205ENST00000469129 ELMO3Q96BJ8 720 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 HPDLQ96IR7 371 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 RHOXF2Q9BQY4 288 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMC1A-205ENST00000469129 PARD6BQ9BYG5 372 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 MCOLN1Q9GZU1 580 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 ANKZF1Q9H8Y5 726 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 ARFGAP3Q9NP61 516 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 ACP6Q9NPH0 428 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 ADAM22Q9P0K1 906 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 NXF1Q9UBU9 619 aaKnown RBP9.95□□□□□ -0.82
SMC1A-205ENST00000469129 STRIP2Q9ULQ0 834 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 TTC7AQ9ULT0 858 aaPredicted RBP9.95□□□□□ -0.82
SMC1A-205ENST00000469129 PACSIN2Q9UNF0 486 aaPredicted RBP9.95□□□□□ -0.82
SMC1A-205ENST00000469129 COG5Q9UP83 839 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 AGAP1Q9UPQ3 857 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 NOC2LQ9Y3T9 749 aaKnown RBP9.95□□□□□ -0.82
SMC1A-205ENST00000469129 TANC1Q9C0D5 1861 aa9.95□□□□□ -0.82
SMC1A-205ENST00000469129 PDE2AO00408 941 aaPredicted RBP9.94□□□□□ -0.82
SMC1A-205ENST00000469129 RRP9O43818 475 aaKnown RBP9.94□□□□□ -0.82
SMC1A-205ENST00000469129 CEP104O60308 925 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 CAPN15O75808 1086 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 RECQL4O94761 1208 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 PGK1P00558 417 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 CYP3A5P20815 502 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 CDH5P33151 784 aaPredicted RBP9.94□□□□□ -0.82
SMC1A-205ENST00000469129 MAN1A1P33908 653 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 SLC1A1P43005 524 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 INCA1Q0VD86 236 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 HIC1Q14526 733 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 TWF2Q6IBS0 349 aaKnown RBP9.94□□□□□ -0.82
SMC1A-205ENST00000469129 CXCL17Q6UXB2 119 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 CTU1Q7Z7A3 348 aaKnown RBP9.94□□□□□ -0.82
SMC1A-205ENST00000469129 RNF180Q86T96 592 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 SERINC5Q86VE9 423 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.94□□□□□ -0.82
SMC1A-205ENST00000469129 RAET1EQ8TD07 263 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 PXYLP1Q8TE99 480 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 ZNF606Q8WXB4 792 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 ZSWIM1Q9BR11 485 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 C11orf70Q9BRQ4 267 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 MIS12Q9H081 205 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 CHST12Q9NRB3 414 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 SNTG2Q9NY99 539 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 ANAPC7Q9UJX3 599 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 KIAA1257Q9ULG3 409 aa9.94□□□□□ -0.82
SMC1A-205ENST00000469129 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMC1A-205ENST00000469129 MOXD2PA6NHM9 499 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 TMEM110-MUSTN1A8MSY1 372 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 DDX3YO15523 660 aaKnown RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 MEFVO15553 781 aaPredicted RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 CAND2O75155 1236 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 CILPO75339 1184 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 RPS6KA5O75582 802 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 ASGR1P07306 291 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 WEE2P0C1S8 567 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 VDRP11473 427 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 CD19P15391 556 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 BRD2P25440 801 aaKnown RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 TNFRSF8P28908 595 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 CTNNA1P35221 906 aaKnown RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 RAB27AP51159 221 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 IRX5P78411 483 aaPredicted RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 ZNF200P98182 395 aaPredicted RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 MESDQ14696 234 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 SV2CQ496J9 727 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 SGO2Q562F6 1265 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 CC2D1AQ6P1N0 951 aaPredicted RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 FAM228AQ86W67 206 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 PASD1Q8IV76 773 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 SLAIN1Q8ND83 568 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 KLHDC9Q8NEP7 349 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 CXorf38Q8TB03 319 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 CD99L2Q8TCZ2 262 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 TMEM40Q8WWA1 233 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 CPA5Q8WXQ8 436 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms