RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 ATAD1Q8NBU5 361 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 LRRC3BQ96PB8 259 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 SLITRK6Q9H5Y7 841 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 PARD6AQ9NPB6 346 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 LARSQ9P2J5 1176 aaKnown RBP13.32□□□□□ -0.28
COL5A1-207ENST00000469093 DNAH14Q0VDD8 3507 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 VWA3AA6NCI4 1184 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 H0YCG3 227 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 PPEF2O14830 753 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 CHADO15335 359 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 ALDH1A3P47895 512 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 LILRA4P59901 499 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 SATB1Q01826 763 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 PPP2R3AQ06190 1150 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 FCHO2Q0JRZ9 810 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 PLD1Q13393 1074 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 PPP2R5DQ14738 602 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 ENOX2Q16206 610 aaKnown RBP13.31□□□□□ -0.28
COL5A1-207ENST00000469093 LPAL2Q16609 132 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 KYAT1Q16773 422 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 TMEM119Q4V9L6 283 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 SPATA1Q5VX52 437 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 MCTP1Q6DN14 999 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 GAREM2Q75VX8 874 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 CSGALNACT1Q8TDX6 532 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 BICD1Q96G01 975 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 TSPAN18Q96SJ8 248 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 MKNK1Q9BUB5 465 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 TBX20Q9UMR3 447 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 USP18Q9UMW8 372 aa13.31□□□□□ -0.28
COL5A1-207ENST00000469093 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.31□□□□□ -0.28
COL5A1-207ENST00000469093 SDK1Q7Z5N4 2213 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 A0A0B4J269 797 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 MTMR11A4FU01 709 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 HRO43593 1189 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 PIGRP01833 764 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 TYMPP19971 482 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 SOX9P48436 509 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 LIG4P49917 911 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 MYBPC2Q14324 1141 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 WDR44Q5JSH3 913 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 ARL6IP4Q66PJ3 421 aaKnown RBP13.3□□□□□ -0.28
COL5A1-207ENST00000469093 OVOS1Q6IE37 1185 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 YAF2Q8IY57 180 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 SPEM1Q8N4L4 309 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 TTC9BQ8N6N2 239 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 PSMG2Q969U7 264 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 CDK5RAP3Q96JB5 506 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 TMEM209Q96SK2 561 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 REEP2Q9BRK0 252 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 RPF1Q9H9Y2 349 aaKnown RBP13.3□□□□□ -0.28
COL5A1-207ENST00000469093 RBM12Q9NTZ6 932 aaKnown RBP13.3□□□□□ -0.28
COL5A1-207ENST00000469093 GMEB2Q9UKD1 530 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 ASB3Q9Y575 518 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 CACNA1BQ00975 2339 aa13.3□□□□□ -0.28
COL5A1-207ENST00000469093 MYBPHLA2RUH7 354 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 DCDC2BA2VCK2 349 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 SLC38A8A6NNN8 435 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 PIRO00625 290 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 HNRNPDLO14979 420 aaKnown RBP13.29□□□□□ -0.28
COL5A1-207ENST00000469093 OGTO15294 1046 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 XPOTO43592 962 aaKnown RBP13.29□□□□□ -0.28
COL5A1-207ENST00000469093 SOAT2O75908 522 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 KPNA1P52294 538 aaPredicted RBP13.29□□□□□ -0.28
COL5A1-207ENST00000469093 DMWDQ09019 674 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 SPEM2Q0P670 501 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 LAIR1Q6GTX8 287 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 JADE1Q6IE81 842 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 ARMCX5Q6P1M9 558 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 SLC39A4Q6P5W5 647 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 C1orf228Q6PIY5 440 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 TXNDC11Q6PKC3 985 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 MYCT1Q8N699 235 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 TTC8Q8TAM2 541 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 LRRC15Q8TF66 581 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 FAM212AQ96EL1 285 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 MSANTD3Q96H12 275 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 ZFYVE19Q96K21 471 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 SENP8Q96LD8 212 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 ATXN3LQ9H3M9 355 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 C8orf33Q9H7E9 229 aaPredicted RBP13.29□□□□□ -0.28
COL5A1-207ENST00000469093 HSFX1Q9UBD0 423 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 CPSF3Q9UKF6 684 aaKnown RBP13.29□□□□□ -0.28
COL5A1-207ENST00000469093 CDV3Q9UKY7 258 aaKnown RBP13.29□□□□□ -0.28
COL5A1-207ENST00000469093 RAB23Q9ULC3 237 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 ODF2LQ9ULJ1 636 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 ACACBO00763 2458 aa13.29□□□□□ -0.28
COL5A1-207ENST00000469093 EPG5Q9HCE0 2579 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 CHURC1-FNTBB4DL54 471 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 SPECC1L-ADORA2AF8WAN1 911 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 K7ESF4 209 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 TRAK2O60296 914 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 RETP07949 1114 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 SCP2P22307 547 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 PAX3P23760 479 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 GABRR2P28476 465 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 FNTBP49356 437 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 ZNF131P52739 623 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 SIM2Q14190 667 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms