RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 GOLGA8AA7E2F4 631 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 DIRC3C9JPN6 131 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 M0R3H8 397 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 NRP2O60462 931 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 LPXNO60711 386 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 TNFAIP2Q03169 654 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 SEMA5AQ13591 1074 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 TERF2Q15554 542 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 PRR16Q569H4 304 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 FAM133BQ5BKY9 247 aaKnown RBP5.4□□□□□ -1.54
SCFD1-205ENST00000469043 ATAT1Q5SQI0 421 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 FAM180BQ6P0A1 224 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 ESPNLQ6ZVH7 1005 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 TAS1R1Q7RTX1 841 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 OVCH2Q7RTZ1 564 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 ANKRD23Q86SG2 305 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 LILRA3Q8N6C8 439 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-205ENST00000469043 DIS3LQ8TF46 1054 aaKnown RBP5.4□□□□□ -1.54
SCFD1-205ENST00000469043 HPS3Q969F9 1004 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 PKNOX2Q96KN3 472 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 RIPOR3Q96MK2 946 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 APOL5Q9BWW9 433 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 LSM14BQ9BX40 385 aaKnown RBP5.4□□□□□ -1.54
SCFD1-205ENST00000469043 ALDH8A1Q9H2A2 487 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-205ENST00000469043 SPON1Q9HCB6 807 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 KIAA1586Q9HCI6 787 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 RASSF1Q9NS23 344 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 SMC4Q9NTJ3 1288 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 COX11Q9Y6N1 276 aa5.4□□□□□ -1.54
SCFD1-205ENST00000469043 A0A1W2PRQ8 180 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 NCR1O76036 304 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 MBD4O95243 580 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 NDUFA10O95299 355 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 LY86O95711 162 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 PYGLP06737 847 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 BMPR1AP36894 532 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 IL6STP40189 918 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-205ENST00000469043 NRG3P56975 720 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 FAM189BP81408 668 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 PPFIA1Q13136 1202 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 G3BP1Q13283 466 aaKnown RBP eCLIP5.39□□□□□ -1.55
SCFD1-205ENST00000469043 INTS11Q5TA45 600 aaKnown RBP5.39□□□□□ -1.55
SCFD1-205ENST00000469043 LRCH2Q5VUJ6 765 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 ARMC3Q5W041 872 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 CCDC62Q6P9F0 684 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 DARS2Q6PI48 645 aaKnown RBP5.39□□□□□ -1.55
SCFD1-205ENST00000469043 GRAMD1CQ8IYS0 662 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 OR8H2Q8N162 312 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 MIER2Q8N344 545 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 PPP1R35Q8TAP8 253 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 NSUN6Q8TEA1 469 aaKnown RBP5.39□□□□□ -1.55
SCFD1-205ENST00000469043 NTN5Q8WTR8 489 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-205ENST00000469043 NELL1Q92832 810 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 FERMT2Q96AC1 680 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 COQ10AQ96MF6 247 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 TTC14Q96N46 770 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 GTPBP4Q9BZE4 634 aaKnown RBP5.39□□□□□ -1.55
SCFD1-205ENST00000469043 OSBPL5Q9H0X9 879 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-205ENST00000469043 RIC8AQ9NPQ8 531 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 H2AFY2Q9P0M6 372 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-205ENST00000469043 USP36Q9P275 1121 aaKnown RBP5.39□□□□□ -1.55
SCFD1-205ENST00000469043 USP18Q9UMW8 372 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 FRMD4BQ9Y2L6 1034 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 AFG3L2Q9Y4W6 797 aa5.39□□□□□ -1.55
SCFD1-205ENST00000469043 NCAM2O15394 837 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 HLA-DOAP06340 250 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 POU2F2P09086 479 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 IFIT1P09914 478 aaKnown RBP5.38□□□□□ -1.55
SCFD1-205ENST00000469043 HKR1P10072 659 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 GPR3P46089 330 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 GPR15P49685 360 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 PTTG1IPP53801 180 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 GUCY1B3Q02153 619 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 CCDC178Q5BJE1 867 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 WDR45BQ5MNZ6 344 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 TSHZ3Q63HK5 1081 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 LMBR1LQ6UX01 489 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 RD3Q7Z3Z2 195 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 XYLT1Q86Y38 959 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 PLXDC1Q8IUK5 500 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 ANKRD18AQ8IVF6 992 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 CAMKK1Q8N5S9 505 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 OR2C3Q8N628 320 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 GAB3Q8WWW8 586 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 JADE3Q92613 823 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 NAF1Q96HR8 494 aaKnown RBP5.38□□□□□ -1.55
SCFD1-205ENST00000469043 MAP3K14Q99558 947 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 BHMT2Q9H2M3 363 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 TOPORSQ9NS56 1045 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-205ENST00000469043 CDC23Q9UJX2 597 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 INSL6Q9Y581 213 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 ITIH6Q6UXX5 1313 aa5.38□□□□□ -1.55
SCFD1-205ENST00000469043 FAM227AF5H4B4 570 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 K7ENM7 598 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 ELL2O00472 640 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-205ENST00000469043 TGM5O43548 720 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 TUSC2O75896 110 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 SPATA31D3P0C874 917 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 CAPN3P20807 821 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 ABCB4P21439 1286 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms