RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 KIF18AQ8NI77 898 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 TFAP2BQ92481 460 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 TAF4BQ92750 862 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 FAXDC2Q96IV6 333 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 FAM81BQ96LP2 452 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 ZFP42Q96MM3 310 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 TDRD15B5MCY1 1934 aaKnown RBP8.83□□□□□ -1
BRCA1-208ENST00000468300 NCANO14594 1321 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 SPTLC1O15269 473 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 KRT86O43790 486 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 CAND2O75155 1236 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 MYCP01106 439 aaPredicted RBP8.83□□□□□ -1
BRCA1-208ENST00000468300 RPLP2P05387 115 aaKnown RBP8.83□□□□□ -1
BRCA1-208ENST00000468300 ATICP31939 592 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 USP8P40818 1118 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 TERF1P54274 439 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 TMEM270Q6UE05 265 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 LRRC57Q8N9N7 239 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 RBBP8NLQ8NC74 664 aaPredicted RBP8.83□□□□□ -1
BRCA1-208ENST00000468300 ITFG2Q969R8 447 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 THAP2Q9H0W7 228 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 GOLGA2P5Q9HBQ8 144 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 INTUQ9ULD6 942 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 AGAP1Q9UPQ3 857 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 PCDHGC5Q9Y5F6 944 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 ATP1A1P05023 1023 aaKnown RBP8.83□□□□□ -1
BRCA1-208ENST00000468300 CCDC172P0C7W6 258 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 NAT1P18440 290 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 RAD23BP54727 409 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 NCBP1Q09161 790 aaKnown RBP8.83□□□□□ -1
BRCA1-208ENST00000468300 KIF5AQ12840 1032 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 PTP4A2Q12974 167 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 TCEAL1Q15170 157 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 WDR72Q3MJ13 1102 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 C9orf57Q5W0N0 161 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 FMNL3Q8IVF7 1028 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 WDTC1Q8N5D0 677 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 LPPQ93052 612 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 VWCEQ96DN2 955 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 HPDLQ96IR7 371 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 ZNF333Q96JL9 665 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 APOL6Q9BWW8 343 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 TSGA10Q9BZW7 698 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 SQORQ9Y6N5 450 aa8.83□□□□□ -1
BRCA1-208ENST00000468300 GRID2IPA4D2P6 1211 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 TMCO5BA8MYB1 307 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 M0QZ92 97 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 SMAPO00193 183 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 GPR182O15218 404 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 BUB1O43683 1085 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 KIF5CO60282 957 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 NBNO60934 754 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 KRT19P08727 400 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 HSPA8P11142 646 aaKnown RBP8.82□□□□□ -1
BRCA1-208ENST00000468300 KRT5P13647 590 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 TNFAIP3P21580 790 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 SSTR3P32745 418 aaPredicted RBP8.82□□□□□ -1
BRCA1-208ENST00000468300 TRPC3Q13507 836 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 CLEC16AQ2KHT3 1053 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 TWF2Q6IBS0 349 aaKnown RBP8.82□□□□□ -1
BRCA1-208ENST00000468300 SCARA5Q6ZMJ2 495 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 ZNF598Q86UK7 904 aaKnown RBP8.82□□□□□ -1
BRCA1-208ENST00000468300 ELOVL4Q9GZR5 314 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 OSGEPQ9NPF4 335 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 CACNG4Q9UBN1 327 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 FEZ2Q9UHY8 353 aaPredicted RBP8.82□□□□□ -1
BRCA1-208ENST00000468300 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.82□□□□□ -1
BRCA1-208ENST00000468300 PCDHB4Q9Y5E5 795 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 MRFAP1Q9Y605 127 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 A0A0A6YYK5 440 aaPredicted RBP8.82□□□□□ -1
BRCA1-208ENST00000468300 ENC1O14682 589 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 ZNF623O75123 536 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 CILPO75339 1184 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 ZRANB2O95218 330 aaKnown RBP eCLIP8.82□□□□□ -1
BRCA1-208ENST00000468300 TMEM253P0C7T8 217 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 COL6A1P12109 1028 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 GZMAP12544 262 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 CASQ1P31415 396 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 INCA1Q0VD86 236 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 NFX1Q12986 1120 aaKnown RBP8.82□□□□□ -1
BRCA1-208ENST00000468300 PAPD7Q5XG87 772 aaKnown RBP8.82□□□□□ -1
BRCA1-208ENST00000468300 HS6ST3Q8IZP7 471 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 RNF10Q8N5U6 811 aaKnown RBP8.82□□□□□ -1
BRCA1-208ENST00000468300 SLC4A11Q8NBS3 891 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 SUDS3Q9H7L9 328 aaPredicted RBP8.82□□□□□ -1
BRCA1-208ENST00000468300 COL4A6Q14031 1691 aa8.82□□□□□ -1
BRCA1-208ENST00000468300 A0A0U1RQF3 1178 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 FTLP02792 175 aaPredicted RBP8.81□□□□□ -1
BRCA1-208ENST00000468300 CD58P19256 250 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 GTF2F1P35269 517 aaKnown RBP eCLIP8.81□□□□□ -14e-8■■■□□ 16.5
BRCA1-208ENST00000468300 PDE6CP51160 858 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 RBP5P82980 135 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 SMYD5Q6GMV2 418 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 CD300LGQ6UXG3 332 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 SLFN11Q7Z7L1 901 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 CRIPAKQ8N1N5 446 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 ZNF606Q8WXB4 792 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 CYFIP2Q96F07 1278 aa8.81□□□□□ -1
BRCA1-208ENST00000468300 TRIM6Q9C030 488 aaPredicted RBP8.81□□□□□ -1
BRCA1-208ENST00000468300 RNF208Q9H0X6 261 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms