RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ANO9A1A5B4 782 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 MYMKA6NI61 221 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 OR6C75A6NL08 312 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 PPP1R37O75864 691 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 PDCP20941 246 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 VIPR2P41587 438 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 CDR1P51861 262 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 KCNA1Q09470 495 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 TMEM132DQ14C87 1099 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 TEAD2Q15562 447 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 CENPPQ6IPU0 288 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 CRELD2Q6UXH1 353 aaPredicted RBP26.54■■□□□ 1.84
PTCH1-210ENST00000468211 VITQ6UXI7 678 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 TMC8Q8IU68 726 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 ATAD1Q8NBU5 361 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 SHKBP1Q8TBC3 707 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 DNAJC19Q96DA6 116 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 OXCT2Q9BYC2 517 aaPredicted RBP26.54■■□□□ 1.84
PTCH1-210ENST00000468211 ASAH2Q9NR71 780 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 AGO2Q9UKV8 859 aaKnown RBP26.54■■□□□ 1.84
PTCH1-210ENST00000468211 FRYLO94915 3013 aa26.54■■□□□ 1.84
PTCH1-210ENST00000468211 MTMR11A4FU01 709 aa26.53■■□□□ 1.84
PTCH1-210ENST00000468211 ADSSP30520 456 aa26.53■■□□□ 1.84
PTCH1-210ENST00000468211 FZD5Q13467 585 aa26.53■■□□□ 1.84
PTCH1-210ENST00000468211 OR10T2Q8NGX3 314 aa26.53■■□□□ 1.84
PTCH1-210ENST00000468211 SMARCD2Q92925 531 aa26.53■■□□□ 1.84
PTCH1-210ENST00000468211 STRA6Q9BX79 667 aa26.53■■□□□ 1.84
PTCH1-210ENST00000468211 BCO2Q9BYV7 579 aa26.53■■□□□ 1.84
PTCH1-210ENST00000468211 OSBPL6Q9BZF3 934 aa26.53■■□□□ 1.84
PTCH1-210ENST00000468211 STK17AQ9UEE5 414 aa26.53■■□□□ 1.84
PTCH1-210ENST00000468211 DERAQ9Y315 318 aa26.53■■□□□ 1.84
PTCH1-210ENST00000468211 SOAT2O75908 522 aa26.52■■□□□ 1.84
PTCH1-210ENST00000468211 ODC1P11926 461 aa26.52■■□□□ 1.84
PTCH1-210ENST00000468211 MYBPC2Q14324 1141 aa26.52■■□□□ 1.84
PTCH1-210ENST00000468211 RRAGBQ5VZM2 374 aa26.52■■□□□ 1.84
PTCH1-210ENST00000468211 ZSWIM2Q8NEG5 633 aa26.52■■□□□ 1.84
PTCH1-210ENST00000468211 ZSCAN18Q8TBC5 510 aaPredicted RBP26.52■■□□□ 1.84
PTCH1-210ENST00000468211 ASB7Q9H672 318 aa26.52■■□□□ 1.84
PTCH1-210ENST00000468211 BRD9Q9H8M2 597 aa26.52■■□□□ 1.84
PTCH1-210ENST00000468211 SPATA6Q9NWH7 488 aaPredicted RBP26.52■■□□□ 1.84
PTCH1-210ENST00000468211 TBC1D7Q9P0N9 293 aa26.52■■□□□ 1.84
PTCH1-210ENST00000468211 CCDC39Q9UFE4 941 aa26.52■■□□□ 1.84
PTCH1-210ENST00000468211 ABCD1P33897 745 aa26.51■■□□□ 1.83
PTCH1-210ENST00000468211 WNT7BP56706 349 aa26.51■■□□□ 1.83
PTCH1-210ENST00000468211 SLFN12LQ6IEE8 588 aa26.51■■□□□ 1.83
PTCH1-210ENST00000468211 EFCAB13Q8IY85 973 aa26.51■■□□□ 1.83
PTCH1-210ENST00000468211 LEMD2Q8NC56 503 aa26.51■■□□□ 1.83
PTCH1-210ENST00000468211 KCNG4Q8TDN1 519 aa26.51■■□□□ 1.83
PTCH1-210ENST00000468211 DNASE1L2Q92874 299 aa26.51■■□□□ 1.83
PTCH1-210ENST00000468211 CLDN23Q96B33 292 aa26.51■■□□□ 1.83
PTCH1-210ENST00000468211 RSPRY1Q96DX4 576 aa26.51■■□□□ 1.83
PTCH1-210ENST00000468211 USP28Q96RU2 1077 aa26.51■■□□□ 1.83
PTCH1-210ENST00000468211 TRMT61BQ9BVS5 477 aaKnown RBP26.51■■□□□ 1.83
PTCH1-210ENST00000468211 FOXD4L1Q9NU39 408 aa26.51■■□□□ 1.83
PTCH1-210ENST00000468211 A0A087X0B3 334 aa26.5■■□□□ 1.83
PTCH1-210ENST00000468211 A0A1W2PRU2 124 aa26.5■■□□□ 1.83
PTCH1-210ENST00000468211 LMNAP02545 664 aaKnown RBP26.5■■□□□ 1.83
PTCH1-210ENST00000468211 CYP11A1P05108 521 aa26.5■■□□□ 1.83
PTCH1-210ENST00000468211 STXBP5Q5T5C0 1151 aa26.5■■□□□ 1.83
PTCH1-210ENST00000468211 GPIHBP1Q8IV16 184 aa26.5■■□□□ 1.83
PTCH1-210ENST00000468211 FGFBP2Q9BYJ0 223 aa26.5■■□□□ 1.83
PTCH1-210ENST00000468211 PANK2Q9BZ23 570 aa26.5■■□□□ 1.83
PTCH1-210ENST00000468211 TRPV4Q9HBA0 871 aa26.5■■□□□ 1.83
PTCH1-210ENST00000468211 ZNF334Q9HCZ1 680 aaPredicted RBP26.5■■□□□ 1.83
PTCH1-210ENST00000468211 DPP3Q9NY33 737 aa26.5■■□□□ 1.83
PTCH1-210ENST00000468211 MTMR6Q9Y217 621 aa26.5■■□□□ 1.83
PTCH1-210ENST00000468211 C2CD2Q9Y426 696 aa26.5■■□□□ 1.83
PTCH1-210ENST00000468211 OTOGLQ3ZCN5 2332 aa26.5■■□□□ 1.83
PTCH1-210ENST00000468211 NUP210Q8TEM1 1887 aaPredicted RBP26.49■■□□□ 1.83
PTCH1-210ENST00000468211 DCHS1Q96JQ0 3298 aa26.49■■□□□ 1.83
PTCH1-210ENST00000468211 PSMC3P17980 439 aa26.49■■□□□ 1.83
PTCH1-210ENST00000468211 GDI1P31150 447 aa26.49■■□□□ 1.83
PTCH1-210ENST00000468211 CASP5P51878 434 aa26.49■■□□□ 1.83
PTCH1-210ENST00000468211 EPHB3P54753 998 aa26.49■■□□□ 1.83
PTCH1-210ENST00000468211 ZNF852Q6ZMS4 543 aa26.49■■□□□ 1.83
PTCH1-210ENST00000468211 SV2BQ7L1I2 683 aa26.49■■□□□ 1.83
PTCH1-210ENST00000468211 ZNF687Q8N1G0 1237 aa26.49■■□□□ 1.83
PTCH1-210ENST00000468211 POMGNT1Q8WZA1 660 aa26.49■■□□□ 1.83
PTCH1-210ENST00000468211 HVCN1Q96D96 273 aa26.49■■□□□ 1.83
PTCH1-210ENST00000468211 BORCS6Q96GS4 357 aa26.49■■□□□ 1.83
PTCH1-210ENST00000468211 SEMA4AQ9H3S1 761 aa26.49■■□□□ 1.83
PTCH1-210ENST00000468211 MRPL44Q9H9J2 332 aaKnown RBP26.49■■□□□ 1.83
PTCH1-210ENST00000468211 DENND4CQ5VZ89 1909 aa26.48■■□□□ 1.83
PTCH1-210ENST00000468211 ALDH1A3P47895 512 aa26.48■■□□□ 1.83
PTCH1-210ENST00000468211 PLD1Q13393 1074 aa26.48■■□□□ 1.83
PTCH1-210ENST00000468211 ARMCX5Q6P1M9 558 aa26.48■■□□□ 1.83
PTCH1-210ENST00000468211 GAREM2Q75VX8 874 aa26.48■■□□□ 1.83
PTCH1-210ENST00000468211 DNAJB7Q7Z6W7 309 aaPredicted RBP26.48■■□□□ 1.83
PTCH1-210ENST00000468211 PYM1Q9BRP8 204 aaKnown RBP26.48■■□□□ 1.83
PTCH1-210ENST00000468211 MKNK1Q9BUB5 465 aa26.48■■□□□ 1.83
PTCH1-210ENST00000468211 HEPACAM2A8MVW5 462 aa26.47■■□□□ 1.83
PTCH1-210ENST00000468211 CYB561D2O14569 222 aa26.47■■□□□ 1.83
PTCH1-210ENST00000468211 LAMTOR5O43504 91 aa26.47■■□□□ 1.83
PTCH1-210ENST00000468211 PAX3P23760 479 aa26.47■■□□□ 1.83
PTCH1-210ENST00000468211 SLC39A14Q15043 492 aa26.47■■□□□ 1.83
PTCH1-210ENST00000468211 SCARA3Q6AZY7 606 aa26.47■■□□□ 1.83
PTCH1-210ENST00000468211 LRRTM3Q86VH5 581 aa26.47■■□□□ 1.83
PTCH1-210ENST00000468211 FAM84AQ96KN4 292 aa26.47■■□□□ 1.83
PTCH1-210ENST00000468211 NELL2Q99435 816 aa26.47■■□□□ 1.83
PTCH1-210ENST00000468211 ZCWPW1Q9H0M4 648 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms