RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 TWF1Q12792 350 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 BFSP1Q12934 665 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 TDGQ13569 410 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 KNOP1Q1ED39 458 aaKnown RBP12.46□□□□□ -0.41
CDHR3-205ENST00000468143 PABPC1LQ4VXU2 614 aaKnown RBP12.46□□□□□ -0.41
CDHR3-205ENST00000468143 WSCD1Q658N2 575 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 TPGS2Q68CL5 300 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 METTL23Q86XA0 190 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 NT5DC4Q86YG4 428 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 OR5B17Q8NGF7 314 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 OR10T2Q8NGX3 314 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 ASIC4Q96FT7 647 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 CORO1BQ9BR76 489 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 MTMR12Q9C0I1 747 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 CRISPLD1Q9H336 500 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 EPS15L1Q9UBC2 864 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 INSL5Q9Y5Q6 135 aa12.46□□□□□ -0.41
CDHR3-205ENST00000468143 BDP1A6H8Y1 2624 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 FAM237AA0A1B0GTK4 181 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 ARHGEF37A1IGU5 675 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 SOAT2O75908 522 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 ZNF202O95125 648 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 RPN1P04843 607 aaKnown RBP12.45□□□□□ -0.42
CDHR3-205ENST00000468143 CYP11A1P05108 521 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 PAX3P23760 479 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 DUSP4Q13115 394 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 GPR17Q13304 367 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 SNRNP35Q16560 246 aaKnown RBP12.45□□□□□ -0.42
CDHR3-205ENST00000468143 SLC5A9Q2M3M2 681 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 SV2CQ496J9 727 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 KRBA2Q6ZNG9 492 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 HS2ST1Q7LGA3 356 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 UBALD2Q8IYN6 164 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 HS6ST3Q8IZP7 471 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 THEM5Q8N1Q8 247 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 SLC44A3Q8N4M1 653 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 XXYLT1Q8NBI6 393 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 ATAD1Q8NBU5 361 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 KIAA0895Q8NCT3 520 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 CXorf38Q8TB03 319 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 FGF13Q92913 245 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 CCDC127Q96BQ5 260 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 MCRS1Q96EZ8 462 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 RTP3Q9BQQ7 232 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 RPP25Q9BUL9 199 aaKnown RBP12.45□□□□□ -0.42
CDHR3-205ENST00000468143 KIAA1586Q9HCI6 787 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 INTS13Q9NVM9 706 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 CEP72Q9P209 647 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 IGSF9Q9P2J2 1179 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 SIX4Q9UIU6 781 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 CDH7Q9ULB5 785 aa12.45□□□□□ -0.42
CDHR3-205ENST00000468143 MRPS23Q9Y3D9 190 aaKnown RBP12.45□□□□□ -0.42
CDHR3-205ENST00000468143 UBE4BO95155 1302 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 C2orf16Q68DN1 1984 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 EXOC3O60645 756 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 TNNC2P02585 160 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 CFHP08603 1231 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 DLATP10515 647 aaKnown RBP12.44□□□□□ -0.42
CDHR3-205ENST00000468143 PNPLA4P41247 253 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 RBP5P82980 135 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 PSMD2Q13200 908 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 MYBPC2Q14324 1141 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 DUOXA2Q1HG44 320 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 BMT2Q1RMZ1 405 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 SLC39A12Q504Y0 691 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 CENPPQ6IPU0 288 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 POTEHQ6S545 545 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 PARM1Q6UWI2 310 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 RTL10Q7L3V2 364 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 BMP8AQ7Z5Y6 402 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 LRRTM3Q86VH5 581 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 TTC9BQ8N6N2 239 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 TCEAL4Q96EI5 215 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 ANKRD36BP1Q96IX9 119 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 MFSD14AQ96MC6 490 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 ZNF512Q96ME7 567 aaPredicted RBP12.44□□□□□ -0.42
CDHR3-205ENST00000468143 ZNF560Q96MR9 790 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 OXCT2Q9BYC2 517 aaPredicted RBP12.44□□□□□ -0.42
CDHR3-205ENST00000468143 ITGA11Q9UKX5 1188 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 DSEQ9UL01 958 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 MAPK8IP1Q9UQF2 711 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 HCN4Q9Y3Q4 1203 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 YIPF1Q9Y548 306 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 SNX9Q9Y5X1 595 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 NUMBLQ9Y6R0 609 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 PDCD11Q14690 1871 aaKnown RBP12.44□□□□□ -0.42
CDHR3-205ENST00000468143 C5orf42Q9H799 3197 aa12.44□□□□□ -0.42
CDHR3-205ENST00000468143 MTMR11A4FU01 709 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 GOLGA6L4A6NEF3 574 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 ANHXE9PGG2 379 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 NRG2O14511 850 aaPredicted RBP12.43□□□□□ -0.42
CDHR3-205ENST00000468143 HUS1O60921 280 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 CST3P01034 146 aaPredicted RBP12.43□□□□□ -0.42
CDHR3-205ENST00000468143 POU2F2P09086 479 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 MYL4P12829 197 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 GJA1P17302 382 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 TNNI1P19237 187 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 CCR2P41597 374 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 CASP4P49662 377 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 SNRPFP62306 86 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms