RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ADRB2P07550 413 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 NFICP08651 508 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 PSMC3P17980 439 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 TYMPP19971 482 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 EPHB3P54753 998 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 LILRA4P59901 499 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 GPR17Q13304 367 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 PLD1Q13393 1074 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 ZNF528Q3MIS6 628 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 ZC2HC1CQ53FD0 456 aaPredicted RBP22.85■■□□□ 1.25
COL9A3-207ENST00000467819 IRF7Q92985 503 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 SENP8Q96LD8 212 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 TSPAN18Q96SJ8 248 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 TMEM209Q96SK2 561 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 DNAJC25Q9H1X3 360 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 SLC27A5Q9Y2P5 690 aa22.85■■□□□ 1.25
COL9A3-207ENST00000467819 CEP250Q9BV73 2442 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 A0A1W2PRU2 124 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 MTMR11A4FU01 709 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 TISP43B9A030 160 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 SPTLC1O15269 473 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 ODC1P11926 461 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 RPS9P46781 194 aaKnown RBP22.84■■□□□ 1.25
COL9A3-207ENST00000467819 ACOT2P49753 483 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 GTF2BQ00403 316 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 TMEM132DQ14C87 1099 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 C9orf57Q5W0N0 161 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 TMC8Q8IU68 726 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 CD302Q8IX05 232 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 TTC9BQ8N6N2 239 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 ATAD1Q8NBU5 361 aa22.84■■□□□ 1.25
COL9A3-207ENST00000467819 ZNF334Q9HCZ1 680 aaPredicted RBP22.84■■□□□ 1.25
COL9A3-207ENST00000467819 MAN2B1O00754 1011 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 SOAT2O75908 522 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 ALDH1A3P47895 512 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 FZD5Q13467 585 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 MYBPC2Q14324 1141 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 ADALQ6DHV7 355 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 CENPPQ6IPU0 288 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 ARMCX5Q6P1M9 558 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 TSSK4Q6SA08 328 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 DCLK2Q8N568 766 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 SUMF1Q8NBK3 374 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 DEPDC1BQ8WUY9 529 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 RUBCNQ92622 972 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 LRRC3Q9BY71 257 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 TRPV4Q9HBA0 871 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 CACNA1AO00555 2505 aa22.83■■□□□ 1.25
COL9A3-207ENST00000467819 KIF26AQ9ULI4 1882 aaPredicted RBP22.83■■□□□ 1.24
COL9A3-207ENST00000467819 HEPACAM2A8MVW5 462 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 ZNF263O14978 683 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 ABCD1P33897 745 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 CDR1P51861 262 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 FOXK2Q01167 660 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 STXBP5Q5T5C0 1151 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 USP49Q70CQ1 688 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 DYMQ7RTS9 669 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 MFSD6LQ8IWD5 586 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 KRI1Q8N9T8 703 aaKnown RBP22.82■■□□□ 1.24
COL9A3-207ENST00000467819 ATRIPQ8WXE1 791 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 EPSTI1Q96J88 318 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 CCSER1Q9C0I3 900 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 GPR88Q9GZN0 384 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 IKZF4Q9H2S9 585 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 PIAS3Q9Y6X2 628 aa22.82■■□□□ 1.24
COL9A3-207ENST00000467819 ZNF638Q14966 1978 aaKnown RBP22.81■■□□□ 1.24
COL9A3-207ENST00000467819 DENND4CQ5VZ89 1909 aa22.81■■□□□ 1.24
COL9A3-207ENST00000467819 PIRO00625 290 aa22.81■■□□□ 1.24
COL9A3-207ENST00000467819 DDIT3P35638 169 aa22.81■■□□□ 1.24
COL9A3-207ENST00000467819 MTAPQ13126 283 aa22.81■■□□□ 1.24
COL9A3-207ENST00000467819 SFR1Q86XK3 245 aa22.81■■□□□ 1.24
COL9A3-207ENST00000467819 GPIHBP1Q8IV16 184 aa22.81■■□□□ 1.24
COL9A3-207ENST00000467819 OR10T2Q8NGX3 314 aa22.81■■□□□ 1.24
COL9A3-207ENST00000467819 AGO2Q9UKV8 859 aaKnown RBP22.81■■□□□ 1.24
COL9A3-207ENST00000467819 DERAQ9Y315 318 aa22.81■■□□□ 1.24
COL9A3-207ENST00000467819 PCDHGA2Q9Y5H1 932 aa22.81■■□□□ 1.24
COL9A3-207ENST00000467819 CLIC4Q9Y696 253 aa22.81■■□□□ 1.24
COL9A3-207ENST00000467819 DNAH14Q0VDD8 3507 aa22.81■■□□□ 1.24
COL9A3-207ENST00000467819 ANO9A1A5B4 782 aa22.8■■□□□ 1.24
COL9A3-207ENST00000467819 SLC39A12Q504Y0 691 aa22.8■■□□□ 1.24
COL9A3-207ENST00000467819 YAF2Q8IY57 180 aa22.8■■□□□ 1.24
COL9A3-207ENST00000467819 FAM3CQ92520 227 aa22.8■■□□□ 1.24
COL9A3-207ENST00000467819 RSPRY1Q96DX4 576 aa22.8■■□□□ 1.24
COL9A3-207ENST00000467819 ASB7Q9H672 318 aa22.8■■□□□ 1.24
COL9A3-207ENST00000467819 TRPV5Q9NQA5 729 aa22.8■■□□□ 1.24
COL9A3-207ENST00000467819 PRMT8Q9NR22 394 aaPredicted RBP22.8■■□□□ 1.24
COL9A3-207ENST00000467819 ZSCAN32Q9NX65 697 aa22.8■■□□□ 1.24
COL9A3-207ENST00000467819 PAX3P23760 479 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 SLFN12LQ6IEE8 588 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 ERMP1Q7Z2K6 904 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 DNAJB7Q7Z6W7 309 aaPredicted RBP22.79■■□□□ 1.24
COL9A3-207ENST00000467819 ZNF687Q8N1G0 1237 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 ZBTB44Q8NCP5 570 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 CSGALNACT1Q8TDX6 532 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 POMGNT1Q8WZA1 660 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 PSMG2Q969U7 264 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 RMDN1Q96DB5 314 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 SEPT5Q99719 369 aaPredicted RBP22.79■■□□□ 1.24
COL9A3-207ENST00000467819 PYM1Q9BRP8 204 aaKnown RBP22.79■■□□□ 1.24
COL9A3-207ENST00000467819 CHRDQ9H2X0 955 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms