RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 ATG2AQ2TAZ0 1938 aa14.66□□□□□ -0.06
SSBP1-206ENST00000467681 VWA8A3KMH1 1905 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 SLC16A3O15427 465 aaKnown RBP14.65□□□□□ -0.06
SSBP1-206ENST00000467681 PHACTR2O75167 634 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 ABLIM3O94929 683 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 FAM163BP0C2L3 166 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 SPATA31D3P0C874 917 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 EPB41P11171 864 aaKnown RBP14.65□□□□□ -0.06
SSBP1-206ENST00000467681 ODC1P11926 461 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 BMP1P13497 986 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 GTF2H1P32780 548 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 STX17P56962 302 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 NLRP12P59046 1061 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 PAK1Q13153 545 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 TRPC3Q13507 836 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 ZACNQ401N2 412 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 OVOS1Q6IE37 1185 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 C15orf39Q6ZRI6 1047 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 RBM43Q6ZSC3 357 aaKnown RBP14.65□□□□□ -0.06
SSBP1-206ENST00000467681 SPATA31D4Q6ZUB0 917 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 LIMS2Q7Z4I7 341 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 METTL23Q86XA0 190 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 DPP7Q9UHL4 492 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 RWDD2AQ9UIY3 292 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 CTNND2Q9UQB3 1225 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 CDY1Q9Y6F8 540 aa14.65□□□□□ -0.06
SSBP1-206ENST00000467681 GRXCR2A6NFK2 248 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 OR6C75A6NL08 312 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 HUS1O60921 280 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 STAU1O95793 577 aaKnown RBP14.64□□□□□ -0.07
SSBP1-206ENST00000467681 ATICP31939 592 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 MYL6P60660 151 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 PPP3CAQ08209 521 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 BIRC3Q13489 604 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 CLUL1Q15846 466 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 TDRD10Q5VZ19 366 aaKnown RBP14.64□□□□□ -0.07
SSBP1-206ENST00000467681 PTCRAQ6ISU1 281 aaPredicted RBP14.64□□□□□ -0.07
SSBP1-206ENST00000467681 ZNF280DQ6N043 979 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 DPH6Q7L8W6 267 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 FRMD5Q7Z6J6 570 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 TOP6BLQ8N6T0 577 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 C12orf76Q8N812 135 aaPredicted RBP14.64□□□□□ -0.07
SSBP1-206ENST00000467681 SMRP1Q8NCR6 262 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 KREMEN2Q8NCW0 462 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 ZNF461Q8TAF7 563 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 MED15Q96RN5 788 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 SRRTQ9BXP5 876 aaKnown RBP14.64□□□□□ -0.07
SSBP1-206ENST00000467681 XYLT2Q9H1B5 865 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 ADAM7Q9H2U9 754 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 SNX9Q9Y5X1 595 aa14.64□□□□□ -0.07
SSBP1-206ENST00000467681 PAPLNO95428 1278 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 VNN1O95497 513 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 GCLMP48507 274 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 KCNQ1P51787 676 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 ARPP19P56211 112 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 ROR1Q01973 937 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 SMAD4Q13485 552 aaKnown RBP14.63□□□□□ -0.07
SSBP1-206ENST00000467681 NCOA4Q13772 614 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 SOWAHAQ2M3V2 549 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 SGSM1Q2NKQ1 1148 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 UVSSAQ2YD98 709 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 CT47A1Q5JQC4 288 aaPredicted RBP14.63□□□□□ -0.07
SSBP1-206ENST00000467681 TPGS2Q68CL5 300 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 ELMSAN1Q6PJG2 1045 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 RTL10Q7L3V2 364 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 THEM5Q8N1Q8 247 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 TMEM86AQ8N2M4 240 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 PDCL2Q8N4E4 241 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 CMASQ8NFW8 434 aaPredicted RBP14.63□□□□□ -0.07
SSBP1-206ENST00000467681 SPATA18Q8TC71 538 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 SYAP1Q96A49 352 aaPredicted RBP14.63□□□□□ -0.07
SSBP1-206ENST00000467681 RTP3Q9BQQ7 232 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 VRTNQ9H8Y1 702 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 METTL14Q9HCE5 456 aaKnown RBP14.63□□□□□ -0.07
SSBP1-206ENST00000467681 MAN1C1Q9NR34 630 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 ARMCX3Q9UH62 379 aaPredicted RBP14.63□□□□□ -0.07
SSBP1-206ENST00000467681 FBXW11Q9UKB1 542 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 MAFFQ9ULX9 164 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 L1RE1Q9UN81 338 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 TTC28Q96AY4 2481 aa14.63□□□□□ -0.07
SSBP1-206ENST00000467681 GABRDO14764 452 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 MBTPS2O43462 519 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 STX10O60499 249 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 ZMYND10O75800 440 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 FGFR1OPO95684 399 aaKnown RBP14.62□□□□□ -0.07
SSBP1-206ENST00000467681 GNA14O95837 355 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 TRIM49P0CI25 452 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 TRIM49CP0CI26 452 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 ERCC5P28715 1186 aaPredicted RBP14.62□□□□□ -0.07
SSBP1-206ENST00000467681 ITIH3Q06033 890 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 GPR17Q13304 367 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 WDR72Q3MJ13 1102 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 TJAP1Q5JTD0 557 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 ATAT1Q5SQI0 421 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 CCDC183Q5T5S1 534 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 SUSD6Q92537 303 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 TAF4BQ92750 862 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 SFXN1Q9H9B4 322 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 TMEM8AQ9HCN3 771 aa14.62□□□□□ -0.07
SSBP1-206ENST00000467681 AFF4Q9UHB7 1163 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms