RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 NOGQ13253 232 aa5.08□□□□□ -1.6
SMC4-208ENST00000467468 SEPT2Q15019 361 aa5.08□□□□□ -1.6
SMC4-208ENST00000467468 KCNV1Q6PIU1 500 aa5.08□□□□□ -1.6
SMC4-208ENST00000467468 COL23A1Q86Y22 540 aaPredicted RBP5.08□□□□□ -1.6
SMC4-208ENST00000467468 MYLK4Q86YV6 388 aaPredicted RBP5.08□□□□□ -1.6
SMC4-208ENST00000467468 ZC3H10Q96K80 434 aaKnown RBP5.08□□□□□ -1.6
SMC4-208ENST00000467468 FAM167AQ96KS9 214 aa5.08□□□□□ -1.6
SMC4-208ENST00000467468 MRI1Q9BV20 369 aa5.08□□□□□ -1.6
SMC4-208ENST00000467468 MRIQ9BWK5 157 aa5.08□□□□□ -1.6
SMC4-208ENST00000467468 LRRC27Q9C0I9 530 aa5.08□□□□□ -1.6
SMC4-208ENST00000467468 WDR12Q9GZL7 423 aaKnown RBP5.08□□□□□ -1.6
SMC4-208ENST00000467468 ATP6V0A4Q9HBG4 840 aa5.08□□□□□ -1.6
SMC4-208ENST00000467468 GPRC5BQ9NZH0 403 aa5.08□□□□□ -1.6
SMC4-208ENST00000467468 LUZP4Q9P127 313 aa5.08□□□□□ -1.6
SMC4-208ENST00000467468 PCDHA13Q9Y5I0 950 aa5.08□□□□□ -1.6
SMC4-208ENST00000467468 ATRNL1Q5VV63 1379 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 TMEM191CA6NGB0 347 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 LEFTY2O00292 366 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 FOXN3O00409 490 aaPredicted RBP5.07□□□□□ -1.6
SMC4-208ENST00000467468 PHGDHO43175 533 aaKnown RBP5.07□□□□□ -1.6
SMC4-208ENST00000467468 PIP5K1CO60331 668 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 ARIH2O95376 493 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 POMCP01189 267 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 ALDH1A3P47895 512 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 CDC42EP1Q00587 391 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 CREMQ03060 361 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 FGL2Q14314 439 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 PTPAQ15257 358 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 CCDC157Q569K6 752 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 IGFL4Q6B9Z1 124 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 OTUD7BQ6GQQ9 843 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 SKAP1Q86WV1 359 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 NKAPQ8N5F7 415 aaKnown RBP5.07□□□□□ -1.6
SMC4-208ENST00000467468 C3orf20Q8ND61 904 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 FBXO18Q8NFZ0 1043 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 SLC35B2Q8TB61 432 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 CCHCR1Q8TD31 782 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 ANKS1AQ92625 1134 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 MTFMTQ96DP5 389 aaKnown RBP5.07□□□□□ -1.6
SMC4-208ENST00000467468 MYEOVQ96EZ4 313 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 CRB3Q9BUF7 120 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 LDAHQ9H6V9 325 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 ZMAT3Q9HA38 289 aaKnown RBP5.07□□□□□ -1.6
SMC4-208ENST00000467468 ARFGAP3Q9NP61 516 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 CASS4Q9NQ75 786 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 TPCN1Q9ULQ1 816 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 PADI4Q9UM07 663 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 ATP11BQ9Y2G3 1177 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 CHST2Q9Y4C5 530 aa5.07□□□□□ -1.6
SMC4-208ENST00000467468 WDR33Q9C0J8 1336 aaKnown RBP5.06□□□□□ -1.6
SMC4-208ENST00000467468 AHRRA9YTQ3 701 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 NPHP1O15259 732 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 SLPIP03973 132 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 TNFSF4P23510 183 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 CHN2P52757 468 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 INHBCP55103 352 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 ARMC6Q6NXE6 501 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 ZNF529Q6P280 563 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 SEM1Q6ZVN7 128 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 MRGPREQ86SM8 312 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 RSPH3Q86UC2 560 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 SYT12Q8IV01 421 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 RHOT1Q8IXI2 618 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 SMAP1Q8IYB5 467 aaPredicted RBP5.06□□□□□ -1.6
SMC4-208ENST00000467468 CPXCR1Q8N123 301 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 IL31RAQ8NI17 732 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 PROKR1Q8TCW9 393 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 STON2Q8WXE9 905 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 SLC35A4Q96G79 324 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 PHACTR3Q96KR7 559 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 MRGPRX4Q96LA9 322 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 NT5C1BQ96P26 610 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 DMRTA2Q96SC8 542 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 AKIP1Q9NQ31 210 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 STARD7Q9NQZ5 370 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 LMBRD1Q9NUN5 540 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 TDP1Q9NUW8 608 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 FAM30AQ9NZY2 134 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 LRCH1Q9Y2L9 728 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 MORC2Q9Y6X9 1032 aaPredicted RBP5.06□□□□□ -1.6
SMC4-208ENST00000467468 FPGT-TNNI3KV9GXZ4 949 aa5.06□□□□□ -1.6
SMC4-208ENST00000467468 MYBBP1AQ9BQG0 1328 aaKnown RBP5.05□□□□□ -1.6
SMC4-208ENST00000467468 LRRC14BA6NHZ5 514 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 DRGXA6NNA5 263 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 KPNA5O15131 536 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 WDHD1O75717 1129 aaPredicted RBP5.05□□□□□ -1.6
SMC4-208ENST00000467468 TYRP14679 529 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 DDCP20711 480 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 IL6STP40189 918 aaPredicted RBP5.05□□□□□ -1.6
SMC4-208ENST00000467468 SLC6A9P48067 706 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 TNFAIP2Q03169 654 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 DPTQ07507 201 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 ZNF543Q08ER8 600 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 TARDBPQ13148 414 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMC4-208ENST00000467468 MTM1Q13496 603 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 RAB39AQ14964 217 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 IZUMO3Q5VZ72 239 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 RHOUQ7L0Q8 258 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 HEATR3Q7Z4Q2 680 aa5.05□□□□□ -1.6
SMC4-208ENST00000467468 RHOT2Q8IXI1 618 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms