RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 TARDBPQ13148 414 aaKnown RBP eCLIP5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 IL10RAQ13651 578 aa5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 ATP2B3Q16720 1220 aa5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 ATAT1Q5SQI0 421 aa5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 NXNQ6DKJ4 435 aa5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 VWA1Q6PCB0 445 aa5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 JPH3Q8WXH2 748 aaPredicted RBP5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 C7orf25Q9BPX7 421 aa5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 METTL14Q9HCE5 456 aaKnown RBP5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 INTUQ9ULD6 942 aa5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 ENTPD2Q9Y5L3 495 aa5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 KAT6AQ92794 2004 aa5.82□□□□□ -1.48
PRPF40A-205ENST00000467114 KIAA0391O15091 583 aaKnown RBP5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 YY2O15391 372 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 MPPED1O15442 326 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 TSPAN6O43657 245 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 HAUS5O94927 633 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 SCGB1D2O95969 90 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 PF4V1P10720 104 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 PDCP20941 246 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 CCND1P24385 295 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 CREMQ03060 361 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 EPM2AIP1Q7L775 607 aaPredicted RBP5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 SH2D3CQ8N5H7 860 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 DCBLD1Q8N8Z6 715 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 NSUN6Q8TEA1 469 aaKnown RBP5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 AIFM3Q96NN9 605 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 GTPBP4Q9BZE4 634 aaKnown RBP5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 C11orf54Q9H0W9 315 aaPredicted RBP5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 KMT5AQ9NQR1 393 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 ASB6Q9NWX5 421 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 ZNF180Q9UJW8 692 aa5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 G3BP2Q9UN86 482 aaKnown RBP5.81□□□□□ -1.48
PRPF40A-205ENST00000467114 CCDC151A5D8V7 595 aa5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 PARNO95453 639 aaKnown RBP5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 WT1P19544 449 aaPredicted RBP5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 SLC6A4P31645 630 aa5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 SLC16A1P53985 500 aa5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 FAM102BQ5T8I3 360 aa5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 USP45Q70EL2 814 aa5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 GRASPQ7Z6J2 395 aaPredicted RBP5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 TPH2Q8IWU9 490 aa5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 TCEAL8Q8IYN2 117 aa5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 IFI44Q8TCB0 444 aa5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 HPS3Q969F9 1004 aa5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 ANLNQ9NQW6 1124 aa5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 IL17RBQ9NRM6 502 aa5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 INTS13Q9NVM9 706 aa5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 PCDHA13Q9Y5I0 950 aa5.8□□□□□ -1.48
PRPF40A-205ENST00000467114 PRAMEF33A0A0G2JMD5 474 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 CGB1A6NKQ9 187 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 PRAMEF10O60809 474 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 KCNA2P16389 499 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 VCAM1P19320 739 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 MAPK10P53779 464 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 PROK1P58294 105 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 CDC42EP1Q00587 391 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 NBPF8Q3BBV2 869 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 AKNAD1Q5T1N1 836 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 KAZNQ674X7 775 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 ZNF788Q6ZQV5 615 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 CLNKQ7Z7G1 428 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 RHOT1Q8IXI2 618 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 TSR2Q969E8 191 aaKnown RBP5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 HDAC10Q969S8 669 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 VSX1Q9NZR4 365 aaPredicted RBP5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 NEU2Q9Y3R4 380 aa5.79□□□□□ -1.48
PRPF40A-205ENST00000467114 DNAJC9-AS1A6NH13 148 aa5.78□□□□□ -1.48
PRPF40A-205ENST00000467114 GATA3P23771 443 aa5.78□□□□□ -1.48
PRPF40A-205ENST00000467114 RPS7P62081 194 aaKnown RBP5.78□□□□□ -1.48
PRPF40A-205ENST00000467114 CXorf57Q6NSI4 855 aaKnown RBP5.78□□□□□ -1.48
PRPF40A-205ENST00000467114 CATIPQ7Z7H3 387 aa5.78□□□□□ -1.48
PRPF40A-205ENST00000467114 KAT5Q92993 513 aa5.78□□□□□ -1.48
PRPF40A-205ENST00000467114 SARAFQ96BY9 339 aa5.78□□□□□ -1.48
PRPF40A-205ENST00000467114 TLR10Q9BXR5 811 aa5.78□□□□□ -1.48
PRPF40A-205ENST00000467114 CTTNBP2NLQ9P2B4 639 aa5.78□□□□□ -1.48
PRPF40A-205ENST00000467114 CFAP20Q9Y6A4 193 aaKnown RBP5.78□□□□□ -1.48
PRPF40A-205ENST00000467114 WIPF3A6NGB9 483 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 ORC4O43929 436 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 AGFG2O95081 481 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 IL33O95760 270 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 MTHFD1P11586 935 aaKnown RBP5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 CYP2C19P33261 490 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 GRIA3P42263 894 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 TLE1Q04724 770 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 GTF2H3Q13889 308 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 PPP2R5AQ15172 486 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 PTPRRQ15256 657 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 PABPC1LQ4VXU2 614 aaKnown RBP5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 UTP14CQ5TAP6 766 aaKnown RBP5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 PEG10Q86TG7 708 aaKnown RBP5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 MIER2Q8N344 545 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 MAGEB6Q8N7X4 407 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 IL17RDQ8NFM7 739 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 SLC35G2Q8TBE7 412 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 TMEM125Q96AQ2 219 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 RUNDC1Q96C34 613 aa5.77□□□□□ -1.49
PRPF40A-205ENST00000467114 SAP30BPQ9UHR5 308 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms