RNA–Protein interactions for RNA: ENST00000466957.1

SLF1-203, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 5

Gene SLF1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-203ENST00000466957 SLC30A10Q6XR72 485 aa6.97□□□□□ -1.29
SLF1-203ENST00000466957 AMIGO2Q86SJ2 522 aa6.97□□□□□ -1.29
SLF1-203ENST00000466957 COA7Q96BR5 231 aa6.97□□□□□ -1.29
SLF1-203ENST00000466957 VRK1Q99986 396 aaPredicted RBP6.97□□□□□ -1.29
SLF1-203ENST00000466957 CCDC8Q9H0W5 538 aaPredicted RBP6.97□□□□□ -1.29
SLF1-203ENST00000466957 CALCOCO1Q9P1Z2 691 aa6.97□□□□□ -1.29
SLF1-203ENST00000466957 ST3GAL5Q9UNP4 418 aa6.97□□□□□ -1.29
SLF1-203ENST00000466957 PCDHB1Q9Y5F3 818 aa6.97□□□□□ -1.29
SLF1-203ENST00000466957 LINC00473A8K010 186 aa6.96□□□□□ -1.3
SLF1-203ENST00000466957 ABCG1P45844 678 aa6.96□□□□□ -1.3
SLF1-203ENST00000466957 NPTX2P47972 431 aa6.96□□□□□ -1.3
SLF1-203ENST00000466957 PSMC1P62191 440 aaKnown RBP6.96□□□□□ -1.3
SLF1-203ENST00000466957 EXOSC10Q01780 885 aaKnown RBP6.96□□□□□ -1.3
SLF1-203ENST00000466957 FAM50AQ14320 339 aaKnown RBP6.96□□□□□ -1.3
SLF1-203ENST00000466957 PTPRRQ15256 657 aa6.96□□□□□ -1.3
SLF1-203ENST00000466957 RNF187Q5TA31 235 aaPredicted RBP6.96□□□□□ -1.3
SLF1-203ENST00000466957 SARAFQ96BY9 339 aa6.96□□□□□ -1.3
SLF1-203ENST00000466957 LRIG1Q96JA1 1093 aa6.96□□□□□ -1.3
SLF1-203ENST00000466957 TIMP4Q99727 224 aa6.96□□□□□ -1.3
SLF1-203ENST00000466957 SETD1BQ9UPS6 1966 aaKnown RBP6.95□□□□□ -1.3
SLF1-203ENST00000466957 POLRMTO00411 1230 aaKnown RBP6.95□□□□□ -1.3
SLF1-203ENST00000466957 KATNA1O75449 491 aa6.95□□□□□ -1.3
SLF1-203ENST00000466957 GNAI3P08754 354 aa6.95□□□□□ -1.3
SLF1-203ENST00000466957 PROK1P58294 105 aa6.95□□□□□ -1.3
SLF1-203ENST00000466957 GNAI1P63096 354 aa6.95□□□□□ -1.3
SLF1-203ENST00000466957 POU6F2P78424 691 aaPredicted RBP6.95□□□□□ -1.3
SLF1-203ENST00000466957 ITIH3Q06033 890 aa6.95□□□□□ -1.3
SLF1-203ENST00000466957 SRSF4Q08170 494 aaKnown RBP6.95□□□□□ -1.3
SLF1-203ENST00000466957 FOXF2Q12947 444 aa6.95□□□□□ -1.3
SLF1-203ENST00000466957 HLXQ14774 488 aaPredicted RBP6.95□□□□□ -1.3
SLF1-203ENST00000466957 FAM153CQ494X1 144 aa6.95□□□□□ -1.3
SLF1-203ENST00000466957 KHDC1Q4VXA5 237 aaKnown RBP6.95□□□□□ -1.3
SLF1-203ENST00000466957 CCDC93Q567U6 631 aa6.95□□□□□ -1.3
SLF1-203ENST00000466957 LRCH2Q5VUJ6 765 aa6.95□□□□□ -1.3
SLF1-203ENST00000466957 EFCAB2Q5VUJ9 269 aa6.95□□□□□ -1.3
SLF1-203ENST00000466957 TTC7BQ86TV6 843 aa6.95□□□□□ -1.3
SLF1-203ENST00000466957 SRRM1Q8IYB3 904 aaKnown RBP6.95□□□□□ -1.3
SLF1-203ENST00000466957 SLAMF7Q9NQ25 335 aa6.95□□□□□ -1.3
SLF1-203ENST00000466957 SERPINB13Q9UIV8 391 aa6.95□□□□□ -1.3
SLF1-203ENST00000466957 ZNF785A8K8V0 405 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 E7ENX8 843 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 E9PLN8 166 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 F5H697 171 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 INO80B-WBP1J3KQ70 363 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 ANXA1P04083 346 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 ELFN1P0C7U0 828 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 MALP21145 153 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 TAP2Q03519 686 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 SLC4A10Q6U841 1118 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 DMRTA2Q96SC8 542 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 VKORC1Q9BQB6 163 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 INO80BQ9C086 356 aaPredicted RBP6.94□□□□□ -1.3
SLF1-203ENST00000466957 BRD9Q9H8M2 597 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 CFAP20Q9Y6A4 193 aaKnown RBP6.94□□□□□ -1.3
SLF1-203ENST00000466957 WNT6Q9Y6F9 365 aa6.94□□□□□ -1.3
SLF1-203ENST00000466957 NISCHQ9Y2I1 1504 aa6.93□□□□□ -1.3
SLF1-203ENST00000466957 A0A0B4J269 797 aa6.93□□□□□ -1.3
SLF1-203ENST00000466957 MANSC4A6NHS7 340 aaPredicted RBP6.93□□□□□ -1.3
SLF1-203ENST00000466957 F2RL2O00254 374 aa6.93□□□□□ -1.3
SLF1-203ENST00000466957 CDK11BP21127 795 aaKnown RBP6.93□□□□□ -1.3
SLF1-203ENST00000466957 SMARCA1P28370 1054 aa6.93□□□□□ -1.3
SLF1-203ENST00000466957 HNRNPMP52272 730 aaKnown RBP eCLIP6.93□□□□□ -1.39e-7■■■■■ 41.8
SLF1-203ENST00000466957 ATXN1P54253 815 aaKnown RBP6.93□□□□□ -1.3
SLF1-203ENST00000466957 NXPH1P58417 271 aa6.93□□□□□ -1.3
SLF1-203ENST00000466957 TUBB3Q13509 450 aa6.93□□□□□ -1.3
SLF1-203ENST00000466957 PTPN21Q16825 1174 aa6.93□□□□□ -1.3
SLF1-203ENST00000466957 SH2D3CQ8N5H7 860 aa6.93□□□□□ -1.3
SLF1-203ENST00000466957 NSUN6Q8TEA1 469 aaKnown RBP6.93□□□□□ -1.3
SLF1-203ENST00000466957 HAPLN3Q96S86 360 aa6.93□□□□□ -1.3
SLF1-203ENST00000466957 SLC29A3Q9BZD2 475 aa6.93□□□□□ -1.3
SLF1-203ENST00000466957 TPSD1Q9BZJ3 242 aa6.93□□□□□ -1.3
SLF1-203ENST00000466957 KMT5AQ9NQR1 393 aa6.93□□□□□ -1.3
SLF1-203ENST00000466957 GNL3LQ9NVN8 582 aaKnown RBP6.93□□□□□ -1.3
SLF1-203ENST00000466957 GABRDO14764 452 aa6.92□□□□□ -1.3
SLF1-203ENST00000466957 URI1O94763 535 aaPredicted RBP6.92□□□□□ -1.3
SLF1-203ENST00000466957 RHOP08100 348 aa6.92□□□□□ -1.3
SLF1-203ENST00000466957 WT1P19544 449 aaPredicted RBP6.92□□□□□ -1.3
SLF1-203ENST00000466957 CDKN1CP49918 316 aaPredicted RBP6.92□□□□□ -1.3
SLF1-203ENST00000466957 SNAPC2Q13487 334 aa6.92□□□□□ -1.3
SLF1-203ENST00000466957 PTF1AQ7RTS3 328 aa6.92□□□□□ -1.3
SLF1-203ENST00000466957 TMPRSS9Q7Z410 1059 aa6.92□□□□□ -1.3
SLF1-203ENST00000466957 RASAL3Q86YV0 1011 aa6.92□□□□□ -1.3
SLF1-203ENST00000466957 FAM9AQ8IZU1 332 aaPredicted RBP6.92□□□□□ -1.3
SLF1-203ENST00000466957 SCAMP4Q969E2 229 aa6.92□□□□□ -1.3
SLF1-203ENST00000466957 KLC4Q9NSK0 619 aa6.92□□□□□ -1.3
SLF1-203ENST00000466957 RNF7Q9UBF6 113 aa6.92□□□□□ -1.3
SLF1-203ENST00000466957 DNAJC9-AS1A6NH13 148 aa6.91□□□□□ -1.3
SLF1-203ENST00000466957 VWC2LB2RUY7 222 aa6.91□□□□□ -1.3
SLF1-203ENST00000466957 FZD9O00144 591 aa6.91□□□□□ -1.3
SLF1-203ENST00000466957 TRIAP1O43715 76 aa6.91□□□□□ -1.3
SLF1-203ENST00000466957 TTLL1O95922 423 aa6.91□□□□□ -1.3
SLF1-203ENST00000466957 GJB1P08034 283 aa6.91□□□□□ -1.3
SLF1-203ENST00000466957 CCND1P24385 295 aa6.91□□□□□ -1.3
SLF1-203ENST00000466957 CYP2C19P33261 490 aa6.91□□□□□ -1.3
SLF1-203ENST00000466957 NDUFV1P49821 464 aa6.91□□□□□ -1.3
SLF1-203ENST00000466957 ZNF135P52742 658 aaPredicted RBP6.91□□□□□ -1.3
SLF1-203ENST00000466957 ADKP55263 362 aaKnown RBP6.91□□□□□ -1.3
SLF1-203ENST00000466957 KRT85P78386 507 aa6.91□□□□□ -1.3
SLF1-203ENST00000466957 PDSS2Q86YH6 399 aa6.91□□□□□ -1.3
SLF1-203ENST00000466957 CAMKK1Q8N5S9 505 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms