RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 TRMT61BQ9BVS5 477 aaKnown RBP20.77■□□□□ 0.92
COL9A3-206ENST00000466532 CRISPLD1Q9H336 500 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 ST6GALNAC4Q9H4F1 302 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 CCDC39Q9UFE4 941 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 DERAQ9Y315 318 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 OBSL1O75147 1896 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 ZNF292O60281 2723 aa20.77■□□□□ 0.91
COL9A3-206ENST00000466532 LAMTOR5O43504 91 aa20.76■□□□□ 0.91
COL9A3-206ENST00000466532 EPHB3P54753 998 aa20.76■□□□□ 0.91
COL9A3-206ENST00000466532 MYBPC2Q14324 1141 aa20.76■□□□□ 0.91
COL9A3-206ENST00000466532 TEAD2Q15562 447 aa20.76■□□□□ 0.91
COL9A3-206ENST00000466532 SLFN12LQ6IEE8 588 aa20.76■□□□□ 0.91
COL9A3-206ENST00000466532 VITQ6UXI7 678 aa20.76■□□□□ 0.91
COL9A3-206ENST00000466532 SFR1Q86XK3 245 aa20.76■□□□□ 0.91
COL9A3-206ENST00000466532 ZSCAN18Q8TBC5 510 aaPredicted RBP20.76■□□□□ 0.91
COL9A3-206ENST00000466532 SLITRK6Q9H5Y7 841 aa20.76■□□□□ 0.91
COL9A3-206ENST00000466532 ASB7Q9H672 318 aa20.76■□□□□ 0.91
COL9A3-206ENST00000466532 FBXO2Q9UK22 296 aaPredicted RBP20.76■□□□□ 0.91
COL9A3-206ENST00000466532 AGO2Q9UKV8 859 aaKnown RBP20.76■□□□□ 0.91
COL9A3-206ENST00000466532 SLC27A5Q9Y2P5 690 aa20.76■□□□□ 0.91
COL9A3-206ENST00000466532 MRPS17Q9Y2R5 130 aaKnown RBP20.76■□□□□ 0.91
COL9A3-206ENST00000466532 GVINP1Q7Z2Y8 2422 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 MTMR11A4FU01 709 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 PIRO00625 290 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 SPTLC1O15269 473 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 NCAM2O15394 837 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 PSMC3P17980 439 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 PAX3P23760 479 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 GDI1P31150 447 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 VIPR2P41587 438 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 ALDH1A3P47895 512 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 CENPPQ6IPU0 288 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 ARMCX5Q6P1M9 558 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 SHKBP1Q8TBC3 707 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 IRF7Q92985 503 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 TMEM209Q96SK2 561 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 LRRC3Q9BY71 257 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 GPR88Q9GZN0 384 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 DNAJC25Q9H1X3 360 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 STK17AQ9UEE5 414 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 FBXO4Q9UKT5 387 aa20.75■□□□□ 0.91
COL9A3-206ENST00000466532 A0A1W2PRU2 124 aa20.74■□□□□ 0.91
COL9A3-206ENST00000466532 ANO9A1A5B4 782 aa20.74■□□□□ 0.91
COL9A3-206ENST00000466532 ZNF528Q3MIS6 628 aa20.74■□□□□ 0.91
COL9A3-206ENST00000466532 ZNF720Q7Z2F6 126 aa20.74■□□□□ 0.91
COL9A3-206ENST00000466532 TMC8Q8IU68 726 aa20.74■□□□□ 0.91
COL9A3-206ENST00000466532 ATAD1Q8NBU5 361 aa20.74■□□□□ 0.91
COL9A3-206ENST00000466532 DEPDC1BQ8WUY9 529 aa20.74■□□□□ 0.91
COL9A3-206ENST00000466532 CLDN23Q96B33 292 aa20.74■□□□□ 0.91
COL9A3-206ENST00000466532 HVCN1Q96D96 273 aa20.74■□□□□ 0.91
COL9A3-206ENST00000466532 IKZF4Q9H2S9 585 aa20.74■□□□□ 0.91
COL9A3-206ENST00000466532 TRPV4Q9HBA0 871 aa20.74■□□□□ 0.91
COL9A3-206ENST00000466532 ZNF334Q9HCZ1 680 aaPredicted RBP20.74■□□□□ 0.91
COL9A3-206ENST00000466532 C2CD2Q9Y426 696 aa20.74■□□□□ 0.91
COL9A3-206ENST00000466532 SRPRBQ9Y5M8 271 aaKnown RBP20.74■□□□□ 0.91
COL9A3-206ENST00000466532 STYXL1Q9Y6J8 313 aa20.74■□□□□ 0.91
COL9A3-206ENST00000466532 SHISA7A6NL88 538 aa20.73■□□□□ 0.91
COL9A3-206ENST00000466532 TXLNAP40222 546 aa20.73■□□□□ 0.91
COL9A3-206ENST00000466532 CEBPZQ03701 1054 aaKnown RBP20.73■□□□□ 0.91
COL9A3-206ENST00000466532 CSTF1Q05048 431 aaKnown RBP20.73■□□□□ 0.91
COL9A3-206ENST00000466532 RESTQ13127 1097 aa20.73■□□□□ 0.91
COL9A3-206ENST00000466532 RRAGBQ5VZM2 374 aa20.73■□□□□ 0.91
COL9A3-206ENST00000466532 FAM173BQ6P4H8 233 aa20.73■□□□□ 0.91
COL9A3-206ENST00000466532 TTC9BQ8N6N2 239 aa20.73■□□□□ 0.91
COL9A3-206ENST00000466532 OR10T2Q8NGX3 314 aa20.73■□□□□ 0.91
COL9A3-206ENST00000466532 POMGNT1Q8WZA1 660 aa20.73■□□□□ 0.91
COL9A3-206ENST00000466532 CLIC6Q96NY7 704 aa20.73■□□□□ 0.91
COL9A3-206ENST00000466532 MRPL44Q9H9J2 332 aaKnown RBP20.73■□□□□ 0.91
COL9A3-206ENST00000466532 DPP3Q9NY33 737 aa20.73■□□□□ 0.91
COL9A3-206ENST00000466532 NCANO14594 1321 aa20.73■□□□□ 0.91
COL9A3-206ENST00000466532 F5P12259 2224 aa20.73■□□□□ 0.91
COL9A3-206ENST00000466532 EP300Q09472 2414 aaPredicted RBP20.72■□□□□ 0.91
COL9A3-206ENST00000466532 MYMKA6NI61 221 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 MAN2B1O00754 1011 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 KINO60870 393 aaKnown RBP20.72■□□□□ 0.91
COL9A3-206ENST00000466532 PPP1R37O75864 691 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 SOAT2O75908 522 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 CYP11A1P05108 521 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 SYT1P21579 422 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 RPS9P46781 194 aaKnown RBP20.72■□□□□ 0.91
COL9A3-206ENST00000466532 TAF6P49848 677 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 FZD5Q13467 585 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 SV2BQ7L1I2 683 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 MFSD6LQ8IWD5 586 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 E2F7Q96AV8 911 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 HINFPQ9BQA5 517 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 TRPV5Q9NQA5 729 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 TBC1D7Q9P0N9 293 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 SEL1LQ9UBV2 794 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 DSEQ9UL01 958 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 NDRG2Q9UN36 371 aaKnown RBP20.72■□□□□ 0.91
COL9A3-206ENST00000466532 ASB3Q9Y575 518 aa20.72■□□□□ 0.91
COL9A3-206ENST00000466532 FRYLO94915 3013 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 HEPACAM2A8MVW5 462 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 CYB561D2O14569 222 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 ZNF263O14978 683 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 GAP43P17677 238 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 ADSSP30520 456 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 POU5F1Q01860 360 aaKnown RBP20.71■□□□□ 0.91
COL9A3-206ENST00000466532 POSTNQ15063 836 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms