RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 KINO60870 393 aaKnown RBP22.37■■□□□ 1.17
COL6A1-203ENST00000466285 MICAL2O94851 1124 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 CYP3A5P20815 502 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 ACOT2P49753 483 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 GAS6Q14393 721 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 ZNF528Q3MIS6 628 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 SPATA1Q5VX52 437 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 OVOS1Q6IE37 1185 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 IQCEQ6IPM2 695 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 DSTYKQ6XUX3 929 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 ZNF852Q6ZMS4 543 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 GAREM2Q75VX8 874 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 ZBTB44Q8NCP5 570 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 ZSWIM2Q8NEG5 633 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 RUBCNQ92622 972 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 SENP8Q96LD8 212 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 PARVGQ9HBI0 331 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 KIF3AQ9Y496 699 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 PIAS3Q9Y6X2 628 aa22.37■■□□□ 1.17
COL6A1-203ENST00000466285 NCOR2Q9Y618 2525 aa22.36■■□□□ 1.17
COL6A1-203ENST00000466285 HEPACAM2A8MVW5 462 aa22.36■■□□□ 1.17
COL6A1-203ENST00000466285 TRAK2O60296 914 aa22.36■■□□□ 1.17
COL6A1-203ENST00000466285 PSMC3P17980 439 aa22.36■■□□□ 1.17
COL6A1-203ENST00000466285 MARCKSP29966 332 aaPredicted RBP22.36■■□□□ 1.17
COL6A1-203ENST00000466285 RPS9P46781 194 aaKnown RBP22.36■■□□□ 1.17
COL6A1-203ENST00000466285 LILRA4P59901 499 aa22.36■■□□□ 1.17
COL6A1-203ENST00000466285 GPR17Q13304 367 aa22.36■■□□□ 1.17
COL6A1-203ENST00000466285 SF3A1Q15459 793 aaKnown RBP22.36■■□□□ 1.17
COL6A1-203ENST00000466285 C9orf57Q5W0N0 161 aa22.36■■□□□ 1.17
COL6A1-203ENST00000466285 CENPPQ6IPU0 288 aa22.36■■□□□ 1.17
COL6A1-203ENST00000466285 ELMOD1Q8N336 334 aa22.36■■□□□ 1.17
COL6A1-203ENST00000466285 AK8Q96MA6 479 aa22.36■■□□□ 1.17
COL6A1-203ENST00000466285 LPIN3Q9BQK8 851 aa22.36■■□□□ 1.17
COL6A1-203ENST00000466285 RPF1Q9H9Y2 349 aaKnown RBP22.36■■□□□ 1.17
COL6A1-203ENST00000466285 SMC3Q9UQE7 1217 aa22.36■■□□□ 1.17
COL6A1-203ENST00000466285 LILRB5O75023 590 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 PRAMEF12O95522 483 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 ATF6P18850 670 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 UBA7P41226 1012 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 EFCAB13Q8IY85 973 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 KCTD17Q8N5Z5 321 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 STKLD1Q8NE28 680 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 TTC8Q8TAM2 541 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 EPSTI1Q96J88 318 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 ZFYVE19Q96K21 471 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 CHRDQ9H2X0 955 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 SLITRK6Q9H5Y7 841 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 TRPV4Q9HBA0 871 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 RBM12Q9NTZ6 932 aaKnown RBP22.35■■□□□ 1.17
COL6A1-203ENST00000466285 C2orf42Q9NWW7 574 aa22.35■■□□□ 1.17
COL6A1-203ENST00000466285 SMG5Q9UPR3 1016 aaKnown RBP22.35■■□□□ 1.17
COL6A1-203ENST00000466285 ANO9A1A5B4 782 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 SLC38A8A6NNN8 435 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 TYMPP19971 482 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 CYP4F8P98187 520 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 GTF2BQ00403 316 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 DMWDQ09019 674 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 KCNA1Q09470 495 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 LARP1BQ659C4 914 aaKnown RBP22.34■■□□□ 1.17
COL6A1-203ENST00000466285 FAM173BQ6P4H8 233 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 TXNDC11Q6PKC3 985 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 USP37Q86T82 979 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 SFR1Q86XK3 245 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 CALML4Q96GE6 196 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 FGFBP2Q9BYJ0 223 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 PCDHGA2Q9Y5H1 932 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 CLIC4Q9Y696 253 aa22.34■■□□□ 1.17
COL6A1-203ENST00000466285 OR6C75A6NL08 312 aa22.33■■□□□ 1.17
COL6A1-203ENST00000466285 H0YCG3 227 aa22.33■■□□□ 1.17
COL6A1-203ENST00000466285 PIRO00625 290 aa22.33■■□□□ 1.17
COL6A1-203ENST00000466285 KRT18P05783 430 aaKnown RBP22.33■■□□□ 1.17
COL6A1-203ENST00000466285 CCNE1P24864 410 aa22.33■■□□□ 1.17
COL6A1-203ENST00000466285 MAGEA9P43362 315 aa22.33■■□□□ 1.17
COL6A1-203ENST00000466285 SATB1Q01826 763 aa22.33■■□□□ 1.17
COL6A1-203ENST00000466285 TMEM132DQ14C87 1099 aa22.33■■□□□ 1.17
COL6A1-203ENST00000466285 CRELD2Q6UXH1 353 aaPredicted RBP22.33■■□□□ 1.17
COL6A1-203ENST00000466285 Q6ZS52 159 aa22.33■■□□□ 1.17
COL6A1-203ENST00000466285 ERMP1Q7Z2K6 904 aa22.33■■□□□ 1.17
COL6A1-203ENST00000466285 FAM3CQ92520 227 aa22.33■■□□□ 1.17
COL6A1-203ENST00000466285 LARP4BQ92615 738 aaKnown RBP22.33■■□□□ 1.17
COL6A1-203ENST00000466285 SMG9Q9H0W8 520 aaKnown RBP22.33■■□□□ 1.17
COL6A1-203ENST00000466285 ZSCAN32Q9NX65 697 aa22.33■■□□□ 1.17
COL6A1-203ENST00000466285 TBCAO75347 108 aaKnown RBP22.32■■□□□ 1.16
COL6A1-203ENST00000466285 PPP1R37O75864 691 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 ODC1P11926 461 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 ADSSP30520 456 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 PTPAQ15257 358 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 CCDC142Q17RM4 750 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 SLC39A12Q504Y0 691 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 DYMQ7RTS9 669 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 LRRTM3Q86VH5 581 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 MFSD6LQ8IWD5 586 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 DEPDC1BQ8WUY9 529 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 IRF7Q92985 503 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 EPC1Q9H2F5 836 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 IL21Q9HBE4 155 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 MAFFQ9ULX9 164 aa22.32■■□□□ 1.16
COL6A1-203ENST00000466285 ZNF638Q14966 1978 aaKnown RBP22.31■■□□□ 1.16
COL6A1-203ENST00000466285 ZNF263O14978 683 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 CHRNB1P11230 501 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms