RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 CXorf38Q8TB03 319 aa17.12■□□□□ 0.33
AGRN-204ENST00000466223 TAF4BQ92750 862 aa17.12■□□□□ 0.33
AGRN-204ENST00000466223 CASP10Q92851 521 aa17.12■□□□□ 0.33
AGRN-204ENST00000466223 HLA-CQ95604 372 aa17.12■□□□□ 0.33
AGRN-204ENST00000466223 GDAP2Q9NXN4 497 aa17.12■□□□□ 0.33
AGRN-204ENST00000466223 MAGEC2Q9UBF1 373 aaPredicted RBP17.12■□□□□ 0.33
AGRN-204ENST00000466223 MTRRQ9UBK8 725 aa17.12■□□□□ 0.33
AGRN-204ENST00000466223 TIMM13Q9Y5L4 95 aaPredicted RBP17.12■□□□□ 0.33
AGRN-204ENST00000466223 OAZ2O95190 189 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 STAU1O95793 577 aaKnown RBP17.11■□□□□ 0.33
AGRN-204ENST00000466223 GLUD1P00367 558 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 C1RP00736 705 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 P4HA1P13674 534 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 RPL17P18621 184 aaKnown RBP17.11■□□□□ 0.33
AGRN-204ENST00000466223 OR1D2P34982 312 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 GTF2F1P35269 517 aaKnown RBP eCLIP17.11■□□□□ 0.33
AGRN-204ENST00000466223 PIK3CAP42336 1068 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 MXI1P50539 228 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 MCCD1P59942 119 aaPredicted RBP17.11■□□□□ 0.33
AGRN-204ENST00000466223 MYL6P60660 151 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 TYRO3Q06418 890 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 PPP3CAQ08209 521 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 CETN1Q12798 172 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 MRPL58Q14197 206 aaKnown RBP17.11■□□□□ 0.33
AGRN-204ENST00000466223 NFKBIBQ15653 356 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 ZNF699Q32M78 642 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 WDR72Q3MJ13 1102 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 C1orf220Q5T0J3 134 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 LLGL2Q6P1M3 1020 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 DPH6Q7L8W6 267 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 PALB2Q86YC2 1186 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 TMEM86AQ8N2M4 240 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 TOP6BLQ8N6T0 577 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 MMS19Q96T76 1030 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 CLSTN3Q9BQT9 956 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 CDY1Q9Y6F8 540 aa17.11■□□□□ 0.33
AGRN-204ENST00000466223 N4BP1O75113 896 aaKnown RBP17.1■□□□□ 0.33
AGRN-204ENST00000466223 HLA-DRAP01903 254 aa17.1■□□□□ 0.33
AGRN-204ENST00000466223 CYP11A1P05108 521 aa17.1■□□□□ 0.33
AGRN-204ENST00000466223 ARPP19P56211 112 aa17.1■□□□□ 0.33
AGRN-204ENST00000466223 ZNF667Q5HYK9 610 aa17.1■□□□□ 0.33
AGRN-204ENST00000466223 C15orf39Q6ZRI6 1047 aa17.1■□□□□ 0.33
AGRN-204ENST00000466223 ENOX1Q8TC92 643 aaKnown RBP17.1■□□□□ 0.33
AGRN-204ENST00000466223 THAP9Q9H5L6 903 aa17.1■□□□□ 0.33
AGRN-204ENST00000466223 NXF1Q9UBU9 619 aaKnown RBP17.1■□□□□ 0.33
AGRN-204ENST00000466223 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.1■□□□□ 0.33
AGRN-204ENST00000466223 HCFC2Q9Y5Z7 792 aa17.1■□□□□ 0.33
AGRN-204ENST00000466223 OR6C75A6NL08 312 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 MTIF2P46199 727 aaKnown RBP17.09■□□□□ 0.33
AGRN-204ENST00000466223 LHX1P48742 406 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 CLCN4P51793 760 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 MARSP56192 900 aaKnown RBP17.09■□□□□ 0.33
AGRN-204ENST00000466223 MYL7Q01449 175 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 RAB33AQ14088 237 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 CTC1Q2NKJ3 1217 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 WDR44Q5JSH3 913 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 WSCD1Q658N2 575 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 TMEM184AQ6ZMB5 413 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 FBXL13Q8NEE6 735 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 SPATA18Q8TC71 538 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 SLC35C1Q96A29 364 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 CNOT6LQ96LI5 555 aaKnown RBP17.09■□□□□ 0.33
AGRN-204ENST00000466223 MED15Q96RN5 788 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 DNAJC25Q9H1X3 360 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 UBE2ZQ9H832 354 aaPredicted RBP17.09■□□□□ 0.33
AGRN-204ENST00000466223 VRTNQ9H8Y1 702 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 DZANK1Q9NVP4 752 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 FBXL5Q9UKA1 691 aa17.09■□□□□ 0.33
AGRN-204ENST00000466223 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.08■□□□□ 0.32
AGRN-204ENST00000466223 SYCE3A1L190 88 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 LINC01565O15544 149 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 VNN1O95497 513 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 FAM163BP0C2L3 166 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 CPB1P15086 417 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 ELF1P32519 619 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 AAK1Q2M2I8 961 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 SCARA3Q6AZY7 606 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 SLC8B1Q6J4K2 584 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 TRIM59Q8IWR1 403 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 PDCL2Q8N4E4 241 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 TAS1R2Q8TE23 839 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 SLC22A17Q8WUG5 538 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 HDAC7Q8WUI4 952 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 PLEKHA4Q9H4M7 779 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 RAB20Q9NX57 234 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 L1RE1Q9UN81 338 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 NFE2L3Q9Y4A8 694 aa17.08■□□□□ 0.32
AGRN-204ENST00000466223 TGM5O43548 720 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 TBC1D4O60343 1298 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 ASS1P00966 412 aaKnown RBP17.07■□□□□ 0.32
AGRN-204ENST00000466223 AFPP02771 609 aaKnown RBP17.07■□□□□ 0.32
AGRN-204ENST00000466223 EPCAMP16422 314 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 HOXB8P17481 243 aaPredicted RBP17.07■□□□□ 0.32
AGRN-204ENST00000466223 KCNA5P22460 613 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 FMO5P49326 533 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 TSPY1Q01534 308 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 KCNH2Q12809 1159 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 COL19A1Q14993 1142 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 SOWAHAQ2M3V2 549 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 ANO6Q4KMQ2 910 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms