RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ITGA4P13612 1032 aa19.92■□□□□ 0.78
CAPN3-209ENST00000466222 IGFBP6P24592 240 aaPredicted RBP19.92■□□□□ 0.78
CAPN3-209ENST00000466222 ITGB8P26012 769 aa19.92■□□□□ 0.78
CAPN3-209ENST00000466222 POLR2BP30876 1174 aaKnown RBP19.92■□□□□ 0.78
CAPN3-209ENST00000466222 SOX4Q06945 474 aaPredicted RBP19.92■□□□□ 0.78
CAPN3-209ENST00000466222 C1orf53Q5VUE5 145 aa19.92■□□□□ 0.78
CAPN3-209ENST00000466222 LUC7LQ9NQ29 371 aaKnown RBP19.92■□□□□ 0.78
CAPN3-209ENST00000466222 AGAP1Q9UPQ3 857 aa19.92■□□□□ 0.78
CAPN3-209ENST00000466222 MACROD2A1Z1Q3 448 aa19.91■□□□□ 0.78
CAPN3-209ENST00000466222 AKR1B10O60218 316 aa19.91■□□□□ 0.78
CAPN3-209ENST00000466222 EVI5O60447 810 aa19.91■□□□□ 0.78
CAPN3-209ENST00000466222 SOX5P35711 763 aa19.91■□□□□ 0.78
CAPN3-209ENST00000466222 EIF4A3P38919 411 aaKnown RBP19.91■□□□□ 0.78
CAPN3-209ENST00000466222 USP8P40818 1118 aa19.91■□□□□ 0.78
CAPN3-209ENST00000466222 CYP27A1Q02318 531 aa19.91■□□□□ 0.78
CAPN3-209ENST00000466222 XKR4Q5GH76 650 aa19.91■□□□□ 0.78
CAPN3-209ENST00000466222 RNF10Q8N5U6 811 aaKnown RBP19.91■□□□□ 0.78
CAPN3-209ENST00000466222 C1orf112Q9NSG2 853 aa19.91■□□□□ 0.78
CAPN3-209ENST00000466222 VPS18Q9P253 973 aa19.91■□□□□ 0.78
CAPN3-209ENST00000466222 POLIQ9UNA4 740 aa19.91■□□□□ 0.78
CAPN3-209ENST00000466222 TFR2Q9UP52 801 aa19.91■□□□□ 0.78
CAPN3-209ENST00000466222 ASIC2Q16515 512 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 SCARA5Q6ZMJ2 495 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 DEFB128Q7Z7B8 93 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 MRPL10Q7Z7H8 261 aaKnown RBP19.9■□□□□ 0.78
CAPN3-209ENST00000466222 CD302Q8IX05 232 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 TMEM39AQ9NV64 488 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 CWC15Q9P013 229 aaKnown RBP19.9■□□□□ 0.78
CAPN3-209ENST00000466222 NXF1Q9UBU9 619 aaKnown RBP19.9■□□□□ 0.78
CAPN3-209ENST00000466222 TBX21Q9UL17 535 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 HYOU1Q9Y4L1 999 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 ARL5CA6NH57 179 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 SRGAP2O75044 1071 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 STAT1P42224 750 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 MFAP3P55082 362 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 PTK2Q05397 1052 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 SGSM1Q2NKQ1 1148 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 ZNF699Q32M78 642 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 TDRD12Q587J7 1177 aaKnown RBP19.9■□□□□ 0.78
CAPN3-209ENST00000466222 NECAB2Q7Z6G3 386 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 CAPZA3Q96KX2 299 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 TRAIPQ9BWF2 469 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 RGS18Q9NS28 235 aa19.9■□□□□ 0.78
CAPN3-209ENST00000466222 ZNF623O75123 536 aa19.89■□□□□ 0.77
CAPN3-209ENST00000466222 ZC3H11AO75152 810 aaKnown RBP eCLIP19.89■□□□□ 0.77
CAPN3-209ENST00000466222 WEE2P0C1S8 567 aa19.89■□□□□ 0.77
CAPN3-209ENST00000466222 MAGEA1P43355 309 aa19.89■□□□□ 0.77
CAPN3-209ENST00000466222 SCNN1GP51170 649 aa19.89■□□□□ 0.77
CAPN3-209ENST00000466222 HNRNPH2P55795 449 aaKnown RBP19.89■□□□□ 0.77
CAPN3-209ENST00000466222 KLHL30Q0D2K2 578 aa19.89■□□□□ 0.77
CAPN3-209ENST00000466222 CUL2Q13617 745 aa19.89■□□□□ 0.77
CAPN3-209ENST00000466222 ASTE1Q2TB18 679 aaPredicted RBP19.89■□□□□ 0.77
CAPN3-209ENST00000466222 WDR72Q3MJ13 1102 aa19.89■□□□□ 0.77
CAPN3-209ENST00000466222 PLEKHG4Q58EX7 1191 aa19.89■□□□□ 0.77
CAPN3-209ENST00000466222 ZNF571Q7Z3V5 609 aaPredicted RBP19.89■□□□□ 0.77
CAPN3-209ENST00000466222 ECHDC2Q86YB7 292 aa19.89■□□□□ 0.77
CAPN3-209ENST00000466222 VWCEQ96DN2 955 aa19.89■□□□□ 0.77
CAPN3-209ENST00000466222 KIAA0100Q14667 2235 aaKnown RBP19.88■□□□□ 0.77
CAPN3-209ENST00000466222 TRIM43BA6NCK2 446 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 C9IYK1 514 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 CYP26A1O43174 497 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 KCNE1P15382 129 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 GCNT1Q02742 428 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 DNAAF5Q86Y56 855 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 COG1Q8WTW3 980 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 SHC3Q92529 594 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 TRIM43Q96BQ3 446 aaPredicted RBP19.88■□□□□ 0.77
CAPN3-209ENST00000466222 IMPG2Q9BZV3 1241 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 PRDM5Q9NQX1 630 aaPredicted RBP19.88■□□□□ 0.77
CAPN3-209ENST00000466222 POMCP01189 267 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 SERPING1P05155 500 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 CLTBP09497 229 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 ACO1P21399 889 aaKnown RBP19.88■□□□□ 0.77
CAPN3-209ENST00000466222 RAP1GAPP47736 663 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 CDH8P55286 799 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 GFPT1Q06210 699 aaPredicted RBP19.88■□□□□ 0.77
CAPN3-209ENST00000466222 CCNI2Q6ZMN8 369 aaPredicted RBP19.88■□□□□ 0.77
CAPN3-209ENST00000466222 ZNF598Q86UK7 904 aaKnown RBP19.88■□□□□ 0.77
CAPN3-209ENST00000466222 CREG2Q8IUH2 290 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 HPDLQ96IR7 371 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 PPP1R10Q96QC0 940 aaKnown RBP19.88■□□□□ 0.77
CAPN3-209ENST00000466222 RNF14Q9UBS8 474 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 ITGA11Q9UKX5 1188 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 DERAQ9Y315 318 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 DUSP10Q9Y6W6 482 aa19.88■□□□□ 0.77
CAPN3-209ENST00000466222 ENPP3O14638 875 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 FGFR1P11362 822 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 CD58P19256 250 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 RFX1P22670 979 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 ASPAP45381 313 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 LMAN1P49257 510 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 SLC24A5Q71RS6 500 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 SLC47A2Q86VL8 602 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 FAM71AQ8IYT1 594 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 BEST2Q8NFU1 509 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 TSPYL2Q9H2G4 693 aaPredicted RBP19.87■□□□□ 0.77
CAPN3-209ENST00000466222 ADAMTS1Q9UHI8 967 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 HPCAL4Q9UM19 191 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 INPP5FQ9Y2H2 1132 aa19.87■□□□□ 0.77
CAPN3-209ENST00000466222 FAN1Q9Y2M0 1017 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms