RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 CETN2P41208 172 aa17.33■□□□□ 0.37
SLX4-202ENST00000466154 MMP13P45452 471 aa17.33■□□□□ 0.37
SLX4-202ENST00000466154 VGLL4Q14135 290 aa17.33■□□□□ 0.37
SLX4-202ENST00000466154 TMED2Q15363 201 aa17.33■□□□□ 0.37
SLX4-202ENST00000466154 MFSD7Q6UXD7 560 aa17.33■□□□□ 0.37
SLX4-202ENST00000466154 PCYT2Q99447 389 aa17.33■□□□□ 0.37
SLX4-202ENST00000466154 STMN4Q9H169 189 aaPredicted RBP17.33■□□□□ 0.37
SLX4-202ENST00000466154 PARVAQ9NVD7 372 aa17.33■□□□□ 0.37
SLX4-202ENST00000466154 HAUS2Q9NVX0 235 aa17.33■□□□□ 0.37
SLX4-202ENST00000466154 AGTPBP1Q9UPW5 1226 aa17.33■□□□□ 0.37
SLX4-202ENST00000466154 TCP11X1B4DZS4 312 aa17.33■□□□□ 0.36
SLX4-202ENST00000466154 OAZ1P54368 228 aa17.33■□□□□ 0.36
SLX4-202ENST00000466154 CDH8P55286 799 aa17.33■□□□□ 0.36
SLX4-202ENST00000466154 NFX1Q12986 1120 aaKnown RBP17.33■□□□□ 0.36
SLX4-202ENST00000466154 HSDL1Q3SXM5 330 aa17.33■□□□□ 0.36
SLX4-202ENST00000466154 TMEM63BQ5T3F8 832 aa17.33■□□□□ 0.36
SLX4-202ENST00000466154 ANKS4BQ8N8V4 417 aa17.33■□□□□ 0.36
SLX4-202ENST00000466154 COPS5Q92905 334 aa17.33■□□□□ 0.36
SLX4-202ENST00000466154 SAYSD1Q9NPB0 183 aa17.33■□□□□ 0.36
SLX4-202ENST00000466154 AVENQ9NQS1 362 aaPredicted RBP17.33■□□□□ 0.36
SLX4-202ENST00000466154 CISHQ9NSE2 258 aa17.33■□□□□ 0.36
SLX4-202ENST00000466154 TJP2Q9UDY2 1190 aa17.33■□□□□ 0.36
SLX4-202ENST00000466154 MYH9P35579 1960 aaKnown RBP17.32■□□□□ 0.36
SLX4-202ENST00000466154 B4GALT5O43286 388 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 FARP2O94887 1054 aaPredicted RBP17.32■□□□□ 0.36
SLX4-202ENST00000466154 ARL2P36404 184 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 MOB2Q70IA6 237 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 ZNF677Q86XU0 584 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 APOBEC3FQ8IUX4 373 aaKnown RBP17.32■□□□□ 0.36
SLX4-202ENST00000466154 MAIP1Q8WWC4 291 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 ELP3Q9H9T3 547 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 FGFR1OP2Q9NVK5 253 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 WHRNQ9P202 907 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 POLIQ9UNA4 740 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 SGK1O00141 431 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 PRKCBP05771 671 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 BRAFP15056 766 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 RTP1P59025 263 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 GPS1Q13098 491 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 NUGGCQ68CJ6 796 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 CYP4X1Q8N118 509 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 ATXN2LQ8WWM7 1075 aaKnown RBP17.32■□□□□ 0.36
SLX4-202ENST00000466154 RBM15Q96T37 977 aaKnown RBP eCLIP17.32■□□□□ 0.36
SLX4-202ENST00000466154 TRAIPQ9BWF2 469 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 NINJ2Q9NZG7 142 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 PCSK1NQ9UHG2 260 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 SCINQ9Y6U3 715 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 TP73O15350 636 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 ADCY3O60266 1144 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 SPAG7O75391 227 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 TBXAS1P24557 533 aaPredicted RBP17.32■□□□□ 0.36
SLX4-202ENST00000466154 ARSEP51690 589 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 CLCN3P51790 818 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 LACTBP83111 547 aaPredicted RBP17.32■□□□□ 0.36
SLX4-202ENST00000466154 ZNF699Q32M78 642 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 TMEM121Q9BTD3 319 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 VPS37BQ9H9H4 285 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 GINM1Q9NU53 330 aa17.32■□□□□ 0.36
SLX4-202ENST00000466154 BANF1O75531 89 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 TTC4O95801 387 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 MAPK6Q16659 721 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 TRMT10CQ7L0Y3 403 aaKnown RBP17.31■□□□□ 0.36
SLX4-202ENST00000466154 ERICH1Q86X53 443 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 EMC1Q8N766 993 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 C12orf50Q8NA57 414 aaPredicted RBP17.31■□□□□ 0.36
SLX4-202ENST00000466154 HOMER3Q9NSC5 361 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 CNTNAP2Q9UHC6 1331 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 SOWAHBA6NEL2 793 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 LAMTOR4Q0VGL1 99 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 PTK6Q13882 451 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 ZNF568Q3ZCX4 644 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 FAM160B1Q5W0V3 765 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 FBXO16Q8IX29 292 aaPredicted RBP17.31■□□□□ 0.36
SLX4-202ENST00000466154 CCDC89Q8N998 374 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 MRPL4Q9BYD3 311 aaKnown RBP17.31■□□□□ 0.36
SLX4-202ENST00000466154 FER1L6Q2WGJ9 1857 aa17.31■□□□□ 0.36
SLX4-202ENST00000466154 ARIH2O95376 493 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 ACTN3Q08043 901 aaPredicted RBP17.3■□□□□ 0.36
SLX4-202ENST00000466154 CNGA2Q16280 664 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 KCNV1Q6PIU1 500 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 ZBTB8OSQ8IWT0 167 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 SEPT1Q8WYJ6 367 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 ZNF112Q9UJU3 913 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 CSADQ9Y600 493 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 COL11A1P12107 1806 aaPredicted RBP17.3■□□□□ 0.36
SLX4-202ENST00000466154 ADM5C9JUS6 153 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 CETPP11597 493 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 IVDP26440 423 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 SLC20A2Q08357 652 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 WDR72Q3MJ13 1102 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 SPDYCQ5MJ68 293 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 GJC2Q5T442 439 aaPredicted RBP17.3■□□□□ 0.36
SLX4-202ENST00000466154 ANKMY2Q8IV38 441 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 TMEM192Q8IY95 271 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 SLC16A10Q8TF71 515 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 TFAP2BQ92481 460 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 IP6K2Q9UHH9 426 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 ADAMTS5Q9UNA0 930 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 GINS2Q9Y248 185 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 PSME4Q14997 1843 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms