RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 PPP1R16BQ96T49 567 aa6.46□□□□□ -1.38
CHMP3-206ENST00000466032 ADAM2Q99965 735 aa6.46□□□□□ -1.38
CHMP3-206ENST00000466032 MRPL9Q9BYD2 267 aaKnown RBP6.46□□□□□ -1.38
CHMP3-206ENST00000466032 TTYH3Q9C0H2 523 aa6.46□□□□□ -1.38
CHMP3-206ENST00000466032 HAPLN2Q9GZV7 340 aa6.46□□□□□ -1.38
CHMP3-206ENST00000466032 INTS2Q9H0H0 1204 aaKnown RBP6.46□□□□□ -1.38
CHMP3-206ENST00000466032 MTIF3Q9H2K0 278 aaKnown RBP6.46□□□□□ -1.38
CHMP3-206ENST00000466032 RSAD1Q9HA92 442 aa6.46□□□□□ -1.38
CHMP3-206ENST00000466032 CYP3A43Q9HB55 503 aa6.46□□□□□ -1.38
CHMP3-206ENST00000466032 TMEM161AQ9NX61 479 aa6.46□□□□□ -1.38
CHMP3-206ENST00000466032 AIPL1Q9NZN9 384 aa6.46□□□□□ -1.38
CHMP3-206ENST00000466032 PARP2Q9UGN5 583 aa6.46□□□□□ -1.38
CHMP3-206ENST00000466032 TBX21Q9UL17 535 aa6.46□□□□□ -1.38
CHMP3-206ENST00000466032 ATP11BQ9Y2G3 1177 aa6.46□□□□□ -1.38
CHMP3-206ENST00000466032 SMIM28A0A1B0GU29 152 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 CCDC66A2RUB6 948 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 C9IYK1 514 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 ZSCAN12O43309 604 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 CSDE1O75534 798 aaKnown RBP6.45□□□□□ -1.38
CHMP3-206ENST00000466032 RECQL4O94761 1208 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 ASS1P00966 412 aaKnown RBP6.45□□□□□ -1.38
CHMP3-206ENST00000466032 MYCP01106 439 aaPredicted RBP6.45□□□□□ -1.38
CHMP3-206ENST00000466032 HLA-DRAP01903 254 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 GYPCP04921 128 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 SERPING1P05155 500 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 EDN1P05305 212 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 CELA2BP08218 269 aaPredicted RBP6.45□□□□□ -1.38
CHMP3-206ENST00000466032 TRIM49P0CI25 452 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 TRIM49CP0CI26 452 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 CXCL8P10145 99 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 FECHP22830 423 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 LRPAP1P30533 357 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 TNFSF9P41273 254 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 PRKCIP41743 596 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 POLR2FP61218 127 aaKnown RBP6.45□□□□□ -1.38
CHMP3-206ENST00000466032 DLG4P78352 724 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 KRT83P78385 493 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 GRIK3Q13003 919 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 PPIGQ13427 754 aaKnown RBP eCLIP6.45□□□□□ -1.387e-11■■□□□ 12.6
CHMP3-206ENST00000466032 ZBTB6Q15916 424 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 TRIM60Q495X7 471 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 SV2CQ496J9 727 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 CBWD6Q4V339 395 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 ZNF667Q5HYK9 610 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 CBWD3Q5JTY5 395 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 CBWD5Q5RIA9 395 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 C1orf220Q5T0J3 134 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 UBXN11Q5T124 520 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 SFMBT2Q5VUG0 894 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 JADE1Q6IE81 842 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 MFSD5Q6N075 450 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 UBE2Q1Q7Z7E8 422 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 ECHDC2Q86YB7 292 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 NPAS4Q8IUM7 802 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 ABI1Q8IZP0 508 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 CEP120Q8N960 986 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 SMG8Q8ND04 991 aaKnown RBP6.45□□□□□ -1.38
CHMP3-206ENST00000466032 LMO3Q8TAP4 145 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 BAG1Q99933 345 aaPredicted RBP6.45□□□□□ -1.38
CHMP3-206ENST00000466032 LSM14BQ9BX40 385 aaKnown RBP6.45□□□□□ -1.38
CHMP3-206ENST00000466032 EIF2AQ9BY44 585 aaKnown RBP6.45□□□□□ -1.38
CHMP3-206ENST00000466032 NIF3L1Q9GZT8 377 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 GANQ9H2C0 597 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 TMX1Q9H3N1 280 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 AGO3Q9H9G7 860 aaKnown RBP6.45□□□□□ -1.38
CHMP3-206ENST00000466032 ZFP64Q9NPA5 681 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 ENAMQ9NRM1 1142 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 FAM207AQ9NSI2 230 aaPredicted RBP6.45□□□□□ -1.38
CHMP3-206ENST00000466032 ABHD10Q9NUJ1 306 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 DPP3Q9NY33 737 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 SNTG2Q9NY99 539 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 KIAA1257Q9ULG3 409 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 LRFN2Q9ULH4 789 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 PCDHB7Q9Y5E2 793 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 WASF2Q9Y6W5 498 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 UMODL1Q5DID0 1318 aa6.45□□□□□ -1.38
CHMP3-206ENST00000466032 ANO9A1A5B4 782 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 TRAPPC3O43617 180 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 NOL4O94818 638 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 AMHP03971 560 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 SLC9A1P19634 815 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 FGFR4P22455 802 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 SOX5P35711 763 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 TAF6P49848 677 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 SNX16P57768 344 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 OSTNP61366 133 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 TNNC1P63316 161 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 NOP14P78316 857 aaKnown RBP6.44□□□□□ -1.38
CHMP3-206ENST00000466032 PTK2Q05397 1052 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 ELAVL2Q12926 359 aaKnown RBP6.44□□□□□ -1.38
CHMP3-206ENST00000466032 FZD5Q13467 585 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 BMS1Q14692 1282 aaKnown RBP6.44□□□□□ -1.38
CHMP3-206ENST00000466032 STILQ15468 1287 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 ZNF699Q32M78 642 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 MSS51Q4VC12 460 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 COL13A1Q5TAT6 717 aaPredicted RBP6.44□□□□□ -1.38
CHMP3-206ENST00000466032 TDRD10Q5VZ19 366 aaKnown RBP6.44□□□□□ -1.38
CHMP3-206ENST00000466032 PDXDC1Q6P996 788 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 RRAGAQ7L523 313 aa6.44□□□□□ -1.38
CHMP3-206ENST00000466032 UNC93AQ86WB7 457 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms