RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CXorf38Q8TB03 319 aa23.54■■□□□ 1.36
LIME1-203ENST00000465591 ZNF507Q8TCN5 953 aa23.54■■□□□ 1.36
LIME1-203ENST00000465591 TCEAL4Q96EI5 215 aa23.54■■□□□ 1.36
LIME1-203ENST00000465591 RTP3Q9BQQ7 232 aa23.54■■□□□ 1.36
LIME1-203ENST00000465591 PDE11AQ9HCR9 933 aa23.54■■□□□ 1.36
LIME1-203ENST00000465591 CEP72Q9P209 647 aa23.54■■□□□ 1.36
LIME1-203ENST00000465591 OR6C75A6NL08 312 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 EIF3DO15371 548 aaKnown RBP eCLIP23.53■■□□□ 1.36
LIME1-203ENST00000465591 TGFB1I1O43294 461 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 CYP11A1P05108 521 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 CFHP08603 1231 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 CEBPBP17676 345 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 PTPN2P17706 415 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 CCR2P41597 374 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 TAF6P49848 677 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 CDR1P51861 262 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 TWF1Q12792 350 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 PRSS36Q5K4E3 855 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 NT5DC4Q86YG4 428 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 CBWD2Q8IUF1 395 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 HS6ST3Q8IZP7 471 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 GPD1LQ8N335 351 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 TTC9BQ8N6N2 239 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 SCFD1Q8WVM8 642 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 NXPE3Q969Y0 559 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 CORO1BQ9BR76 489 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 PYM1Q9BRP8 204 aaKnown RBP23.53■■□□□ 1.36
LIME1-203ENST00000465591 AVENQ9NQS1 362 aaPredicted RBP23.53■■□□□ 1.36
LIME1-203ENST00000465591 MRPS23Q9Y3D9 190 aaKnown RBP23.53■■□□□ 1.36
LIME1-203ENST00000465591 YIPF1Q9Y548 306 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 ZFP37Q9Y6Q3 630 aaPredicted RBP23.53■■□□□ 1.36
LIME1-203ENST00000465591 PTPRJQ12913 1337 aa23.53■■□□□ 1.36
LIME1-203ENST00000465591 A0A1B0GVL5 298 aa23.52■■□□□ 1.36
LIME1-203ENST00000465591 CYB561D2O14569 222 aa23.52■■□□□ 1.36
LIME1-203ENST00000465591 PFKFB1P16118 471 aa23.52■■□□□ 1.36
LIME1-203ENST00000465591 NPR3P17342 541 aa23.52■■□□□ 1.36
LIME1-203ENST00000465591 POLR2BP30876 1174 aaKnown RBP23.52■■□□□ 1.36
LIME1-203ENST00000465591 GPR17Q13304 367 aa23.52■■□□□ 1.36
LIME1-203ENST00000465591 WSCD1Q658N2 575 aa23.52■■□□□ 1.36
LIME1-203ENST00000465591 LMBRD2Q68DH5 695 aaPredicted RBP23.52■■□□□ 1.36
LIME1-203ENST00000465591 CWF19L1Q69YN2 538 aaKnown RBP23.52■■□□□ 1.36
LIME1-203ENST00000465591 STXBP4Q6ZWJ1 553 aa23.52■■□□□ 1.36
LIME1-203ENST00000465591 TMEM105Q8N8V8 129 aa23.52■■□□□ 1.36
LIME1-203ENST00000465591 OXCT2Q9BYC2 517 aaPredicted RBP23.52■■□□□ 1.36
LIME1-203ENST00000465591 KCNH6Q9H252 994 aa23.52■■□□□ 1.36
LIME1-203ENST00000465591 MTMR11A4FU01 709 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 KRBA1A5PL33 1030 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 KLRC4O43908 158 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 ITGB3P05106 788 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 SRFP11831 508 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 PAX3P23760 479 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 KRT85P78386 507 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 DUSP4Q13115 394 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 MYBPC2Q14324 1141 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 NELFCDQ8IXH7 590 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 ATAD1Q8NBU5 361 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 MCRS1Q96EZ8 462 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 SPATA32Q96LK8 384 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 DNAJC25Q9H1X3 360 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 SLC39A2Q9NP94 309 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 AGPAT3Q9NRZ7 376 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 HSPBP1Q9NZL4 362 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 FBXL21Q9UKT6 434 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 MAFFQ9ULX9 164 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 AGAP1Q9UPQ3 857 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 HPSEQ9Y251 543 aa23.51■■□□□ 1.35
LIME1-203ENST00000465591 KPNA7A9QM74 516 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 MOSPD3O75425 235 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 SLFN14P0C7P3 912 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 CMA1P23946 247 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 TCF15Q12870 199 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 CENPPQ6IPU0 288 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 SIX5Q8N196 739 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 GPR152Q8TDT2 470 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 PAGE5Q96GU1 130 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 MTMR12Q9C0I1 747 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 SIX4Q9UIU6 781 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 SLC27A5Q9Y2P5 690 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 COL4A3Q01955 1670 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 PIEZO1Q92508 2521 aa23.5■■□□□ 1.35
LIME1-203ENST00000465591 PVALEFA0A1B0GWK0 134 aa23.49■■□□□ 1.35
LIME1-203ENST00000465591 CLIC2O15247 247 aa23.49■■□□□ 1.35
LIME1-203ENST00000465591 SOAT2O75908 522 aa23.49■■□□□ 1.35
LIME1-203ENST00000465591 NHLH1Q02575 133 aa23.49■■□□□ 1.35
LIME1-203ENST00000465591 SV2CQ496J9 727 aa23.49■■□□□ 1.35
LIME1-203ENST00000465591 CEP57L1Q8IYX8 460 aa23.49■■□□□ 1.35
LIME1-203ENST00000465591 FLCNQ8NFG4 579 aa23.49■■□□□ 1.35
LIME1-203ENST00000465591 OR5B17Q8NGF7 314 aa23.49■■□□□ 1.35
LIME1-203ENST00000465591 KXD1Q9BQD3 176 aa23.49■■□□□ 1.35
LIME1-203ENST00000465591 ZCWPW1Q9H0M4 648 aa23.49■■□□□ 1.35
LIME1-203ENST00000465591 MFSD1Q9H3U5 465 aa23.49■■□□□ 1.35
LIME1-203ENST00000465591 CA14Q9ULX7 337 aa23.49■■□□□ 1.35
LIME1-203ENST00000465591 KIAA0391O15091 583 aaKnown RBP23.48■■□□□ 1.35
LIME1-203ENST00000465591 PI15O43692 258 aa23.48■■□□□ 1.35
LIME1-203ENST00000465591 GJA1P17302 382 aa23.48■■□□□ 1.35
LIME1-203ENST00000465591 GPC5P78333 572 aa23.48■■□□□ 1.35
LIME1-203ENST00000465591 BMT2Q1RMZ1 405 aa23.48■■□□□ 1.35
LIME1-203ENST00000465591 ASTLQ6HA08 431 aaPredicted RBP23.48■■□□□ 1.35
LIME1-203ENST00000465591 LRRTM3Q86VH5 581 aa23.48■■□□□ 1.35
LIME1-203ENST00000465591 CACTINQ8WUQ7 758 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms