RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 AMY1AP04745 511 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 LDHCP07864 332 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 TRPC1P48995 793 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 CLK1P49759 484 aaKnown RBP3.88□□□□□ -1.79
SNX4-202ENST00000465505 VAV2P52735 878 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 CACNA2D1P54289 1103 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 LMOD3Q0VAK6 560 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 FAPQ12884 760 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 FOXR2Q6PJQ5 311 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 UBE3BQ7Z3V4 1068 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 LMNTD2Q8IXW0 634 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 LNX2Q8N448 690 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 AFAP1L2Q8N4X5 818 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 Q8NA96 180 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 VPS37AQ8NEZ2 397 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 GOLGA1Q92805 767 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 PTCD3Q96EY7 689 aaKnown RBP3.88□□□□□ -1.79
SNX4-202ENST00000465505 CYFIP2Q96F07 1278 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 NEUROD6Q96NK8 337 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 AGAP3Q96P47 875 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 AIFM2Q9BRQ8 373 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 ADI1Q9BV57 179 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 SPATA5L1Q9BVQ7 753 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 GSTO2Q9H4Y5 243 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 KIAA1586Q9HCI6 787 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 TMEM140Q9NV12 185 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 TYW1Q9NV66 732 aaKnown RBP3.88□□□□□ -1.79
SNX4-202ENST00000465505 C14orf119Q9NWQ9 140 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 DDX56Q9NY93 547 aaKnown RBP3.88□□□□□ -1.79
SNX4-202ENST00000465505 HSFX1Q9UBD0 423 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 WASHC2AQ641Q2 1341 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 LRRC3CA6NJW4 275 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 CTAGE5O15320 804 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 TEX33O43247 280 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 RBMXL2O75526 392 aaKnown RBP3.87□□□□□ -1.79
SNX4-202ENST00000465505 ZFPL1O95159 310 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 EYA4O95677 639 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 CDK4P11802 303 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 CASQ1P31415 396 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 ATICP31939 592 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 MTNR1BP49286 362 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 ATXN1P54253 815 aaKnown RBP3.87□□□□□ -1.79
SNX4-202ENST00000465505 KRTAP10-11P60412 298 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 NOMO3P69849 1222 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 MRPS35P82673 323 aaKnown RBP3.87□□□□□ -1.79
SNX4-202ENST00000465505 ATP8B2P98198 1209 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 MGAT2Q10469 447 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 STAT4Q14765 748 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 NOMO2Q5JPE7 1267 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 RNF187Q5TA31 235 aaPredicted RBP3.87□□□□□ -1.79
SNX4-202ENST00000465505 CCDC73Q6ZRK6 1079 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 ARHGEF25Q86VW2 580 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 OR2I1PQ8NGU4 316 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 ZNF384Q8TF68 577 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 NUP133Q8WUM0 1156 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 CFAP53Q96M91 514 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 MAP7D2Q96T17 732 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 POLR3CQ9BUI4 534 aaPredicted RBP3.87□□□□□ -1.79
SNX4-202ENST00000465505 CCDC94Q9BW85 323 aaPredicted RBP3.87□□□□□ -1.79
SNX4-202ENST00000465505 CXorf56Q9H5V9 222 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 KCTD5Q9NXV2 234 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 LRIT1Q9P2V4 623 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 ZBTB21Q9ULJ3 1066 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 LZTS1Q9Y250 596 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 MTO1Q9Y2Z2 717 aaKnown RBP3.87□□□□□ -1.79
SNX4-202ENST00000465505 PCDHGA2Q9Y5H1 932 aa3.87□□□□□ -1.79
SNX4-202ENST00000465505 EIF4G1Q04637 1599 aaKnown RBP3.86□□□□□ -1.79
SNX4-202ENST00000465505 KLHL33A6NCF5 533 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 CHL1O00533 1208 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 ERN1O75460 977 aaKnown RBP3.86□□□□□ -1.79
SNX4-202ENST00000465505 KCNA2P16389 499 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 RPL17P18621 184 aaKnown RBP3.86□□□□□ -1.79
SNX4-202ENST00000465505 SOX5P35711 763 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 MASP1P48740 699 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 ZNF132P52740 706 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 SLC5A3P53794 718 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 FOXF2Q12947 444 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 MTM1Q13496 603 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 MAP9Q49MG5 647 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 CCDC92Q53HC0 331 aaPredicted RBP3.86□□□□□ -1.79
SNX4-202ENST00000465505 LHFPL2Q6ZUX7 228 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 OTUD6AQ7L8S5 288 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 FMNL3Q8IVF7 1028 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 COLGALT2Q8IYK4 626 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 ZGPATQ8N5A5 531 aaKnown RBP3.86□□□□□ -1.79
SNX4-202ENST00000465505 SAMD3Q8N6K7 520 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 FITM2Q8N6M3 262 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 CCHCR1Q8TD31 782 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 ACTRT2Q8TDY3 377 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 CHAC2Q8WUX2 184 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 PPM1EQ8WY54 764 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 ANKS1AQ92625 1134 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 AHCYL2Q96HN2 611 aaKnown RBP3.86□□□□□ -1.79
SNX4-202ENST00000465505 MED15Q96RN5 788 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 PNKPQ96T60 521 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 C22orf23Q9BZE7 217 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 KLK15Q9H2R5 256 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 SUDS3Q9H7L9 328 aaPredicted RBP3.86□□□□□ -1.79
SNX4-202ENST00000465505 DNAJC28Q9NX36 388 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 TCEAL9Q9UHQ7 104 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms