RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 EXOC3O60645 756 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 PRPF40AO75400 957 aaKnown RBP14.07□□□□□ -0.16
COL28A1-206ENST00000465339 RFPL2O75678 378 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 CYP11A1P05108 521 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 WEE2P0C1S8 567 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 TMEM191BP0C7N4 346 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 ODC1P11926 461 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 HOXA9P31269 272 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 CYP2J2P51589 502 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 ROR1Q01973 937 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 MYBPC2Q14324 1141 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 DUOXA2Q1HG44 320 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 SV2CQ496J9 727 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 PPM1LQ5SGD2 360 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 SLC9A9Q8IVB4 645 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 ELOA2Q8IYF1 753 aaPredicted RBP14.07□□□□□ -0.16
COL28A1-206ENST00000465339 CSGALNACT2Q8N6G5 542 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 TMC2Q8TDI7 906 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 SMG7Q92540 1137 aaKnown RBP14.07□□□□□ -0.16
COL28A1-206ENST00000465339 ANKRD36BP1Q96IX9 119 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 ZNF560Q96MR9 790 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 GSDMAQ96QA5 445 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 GTPBP4Q9BZE4 634 aaKnown RBP14.07□□□□□ -0.16
COL28A1-206ENST00000465339 KCTD10Q9H3F6 313 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 PIDD1Q9HB75 910 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 INTS13Q9NVM9 706 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 RMND1Q9NWS8 449 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 CDH22Q9UJ99 828 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 DSEQ9UL01 958 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 AGAP1Q9UPQ3 857 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 USTQ9Y2C2 406 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 R3HCC1Q9Y3T6 440 aaKnown RBP14.07□□□□□ -0.16
COL28A1-206ENST00000465339 DENND4AQ7Z401 1863 aa14.07□□□□□ -0.16
COL28A1-206ENST00000465339 C5orf42Q9H799 3197 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 OR6C75A6NL08 312 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 SNPHO15079 494 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 CALUO43852 315 aaPredicted RBP14.06□□□□□ -0.16
COL28A1-206ENST00000465339 SMC2O95347 1197 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 TNNC2P02585 160 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 ITGB3P05106 788 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 C8AP07357 584 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 POU2F2P09086 479 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 ALADP13716 330 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 ATF2P15336 505 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 ELF1P32519 619 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 ARPP19P56211 112 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 RBP5P82980 135 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 CYP24A1Q07973 514 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 PSMD6Q15008 389 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 OVOS1Q6IE37 1185 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 METTL23Q86XA0 190 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 RNF135Q8IUD6 432 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 WDR49Q8IV35 697 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 GUF1Q8N442 669 aaKnown RBP14.06□□□□□ -0.16
COL28A1-206ENST00000465339 LRRC52Q8N7C0 313 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 C1orf127Q8N9H9 656 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 ZNF707Q96C28 371 aaPredicted RBP14.06□□□□□ -0.16
COL28A1-206ENST00000465339 BORCS6Q96GS4 357 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 MFSD14AQ96MC6 490 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 FNBP1Q96RU3 617 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 WDR6Q9NNW5 1121 aaKnown RBP14.06□□□□□ -0.16
COL28A1-206ENST00000465339 DMAC2Q9NW81 257 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 TRAF3IP3Q9Y228 551 aa14.06□□□□□ -0.16
COL28A1-206ENST00000465339 TIMM13Q9Y5L4 95 aaPredicted RBP14.06□□□□□ -0.16
COL28A1-206ENST00000465339 WDR27A2RRH5 827 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 PI4K2BG5E9Z4 385 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 CYB561D2O14569 222 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 XYLBO75191 536 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 TNNI1P19237 187 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 POLR2BP30876 1174 aaKnown RBP14.05□□□□□ -0.16
COL28A1-206ENST00000465339 PNOCQ13519 176 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 OTOP3Q7RTS5 596 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 TCEAL8Q8IYN2 117 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 THEM5Q8N1Q8 247 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 CXorf38Q8TB03 319 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 SLC7A14Q8TBB6 771 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 CCDC127Q96BQ5 260 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 ACSF2Q96CM8 615 aaPredicted RBP14.05□□□□□ -0.16
COL28A1-206ENST00000465339 MTMR12Q9C0I1 747 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 AFF4Q9UHB7 1163 aaKnown RBP14.05□□□□□ -0.16
COL28A1-206ENST00000465339 MYO10Q9HD67 2058 aa14.05□□□□□ -0.16
COL28A1-206ENST00000465339 PRRG1O14668 218 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 KINO60870 393 aaKnown RBP14.04□□□□□ -0.16
COL28A1-206ENST00000465339 NR3C1P04150 777 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 KRT19P08727 400 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 DLATP10515 647 aaKnown RBP14.04□□□□□ -0.16
COL28A1-206ENST00000465339 CPB1P15086 417 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 RPL13P26373 211 aaKnown RBP14.04□□□□□ -0.16
COL28A1-206ENST00000465339 AP3M2P53677 418 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 MYO1EQ12965 1108 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 GPR17Q13304 367 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 NFIL3Q16649 462 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 ZDHHC14Q8IZN3 488 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 OR5B17Q8NGF7 314 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 SPATA20Q8TB22 786 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 SMARCE1Q969G3 411 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 CGRRF1Q99675 332 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 C1QTNF1Q9BXJ1 281 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 GDAP2Q9NXN4 497 aa14.04□□□□□ -0.16
COL28A1-206ENST00000465339 TSC2P49815 1807 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms