RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 KMT5BQ4FZB7 885 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 TPGS2Q68CL5 300 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 EPM2AIP1Q7L775 607 aaPredicted RBP13.16□□□□□ -0.3
XRN1-204ENST00000465074 SUGP1Q8IWZ8 645 aaKnown RBP13.16□□□□□ -0.3
XRN1-204ENST00000465074 UBALD2Q8IYN6 164 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 THEM5Q8N1Q8 247 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 CCDC47Q96A33 483 aaKnown RBP13.16□□□□□ -0.3
XRN1-204ENST00000465074 ANKRD36BP1Q96IX9 119 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 MFSD14AQ96MC6 490 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 TMEM209Q96SK2 561 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 RHOBTB2Q9BYZ6 727 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 MTMR12Q9C0I1 747 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 AGPAT3Q9NRZ7 376 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 USP25Q9UHP3 1055 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 FBXL21Q9UKT6 434 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 SLC27A5Q9Y2P5 690 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 MRPS23Q9Y3D9 190 aaKnown RBP13.16□□□□□ -0.3
XRN1-204ENST00000465074 INSL5Q9Y5Q6 135 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 ARHGEF37A1IGU5 675 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 OR6C75A6NL08 312 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 KPNA7A9QM74 516 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 STK25O00506 426 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 KIAA0391O15091 583 aaKnown RBP13.15□□□□□ -0.3
XRN1-204ENST00000465074 TGFB1I1O43294 461 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 NARSO43776 548 aaKnown RBP13.15□□□□□ -0.3
XRN1-204ENST00000465074 PDGFBP01127 241 aaPredicted RBP13.15□□□□□ -0.3
XRN1-204ENST00000465074 TNNC2P02585 160 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 DLATP10515 647 aaKnown RBP13.15□□□□□ -0.3
XRN1-204ENST00000465074 TNNI1P19237 187 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 TYMPP19971 482 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 NUCB2P80303 420 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 POU5F1Q01860 360 aaKnown RBP13.15□□□□□ -0.3
XRN1-204ENST00000465074 TWF1Q12792 350 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 DUSP4Q13115 394 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 WSCD1Q658N2 575 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 SCARA3Q6AZY7 606 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 NT5DC4Q86YG4 428 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 TCEAL8Q8IYN2 117 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 CCDC127Q96BQ5 260 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 MCRS1Q96EZ8 462 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 ZNF512Q96ME7 567 aaPredicted RBP13.15□□□□□ -0.3
XRN1-204ENST00000465074 ZNF560Q96MR9 790 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 MFSD1Q9H3U5 465 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 GOLPH3LQ9H4A5 285 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 KIAA1586Q9HCI6 787 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 AFF4Q9UHB7 1163 aaKnown RBP13.15□□□□□ -0.3
XRN1-204ENST00000465074 DSEQ9UL01 958 aa13.15□□□□□ -0.3
XRN1-204ENST00000465074 UBE4BO95155 1302 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 TECTAO75443 2155 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 TSC2P49815 1807 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 KLRC4O43908 158 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 EXOC3O60645 756 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 HUS1O60921 280 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 SOAT2O75908 522 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 RPN1P04843 607 aaKnown RBP13.14□□□□□ -0.31
XRN1-204ENST00000465074 RHOP08100 348 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 CFHP08603 1231 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 MYL4P12829 197 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 PAX3P23760 479 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 ALDH1A3P47895 512 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 RBP5P82980 135 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 STK4Q13043 487 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 SURF1Q15526 300 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 SNRNP35Q16560 246 aaKnown RBP13.14□□□□□ -0.31
XRN1-204ENST00000465074 KNOP1Q1ED39 458 aaKnown RBP13.14□□□□□ -0.31
XRN1-204ENST00000465074 SLC39A12Q504Y0 691 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 IQCEQ6IPM2 695 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 HS6ST3Q8IZP7 471 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 C1orf127Q8N9H9 656 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 XXYLT1Q8NBI6 393 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 ATAD1Q8NBU5 361 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 OR5B17Q8NGF7 314 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 FAM200AQ8TCP9 573 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 FGF13Q92913 245 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 FNBP1Q96RU3 617 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 OXCT2Q9BYC2 517 aaPredicted RBP13.14□□□□□ -0.31
XRN1-204ENST00000465074 INTS13Q9NVM9 706 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 IGSF9Q9P2J2 1179 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 EPS15L1Q9UBC2 864 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 ITGA11Q9UKX5 1188 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 CDH7Q9ULB5 785 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 MAPK8IP1Q9UQF2 711 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 HPSEQ9Y251 543 aa13.14□□□□□ -0.31
XRN1-204ENST00000465074 PTPRJQ12913 1337 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 DOCK8Q8NF50 2099 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 A0A1W2PQ27 194 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 A0A1W2PQ64 194 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 A0A1W2PQD8 194 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 ZNF202O95125 648 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 RFX1P22670 979 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 PNPLA4P41247 253 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 EPHB3P54753 998 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 EHHADHQ08426 723 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 PSMD2Q13200 908 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 GPR17Q13304 367 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 DUOXA2Q1HG44 320 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 CYP4A22Q5TCH4 519 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 KRBA2Q6ZNG9 492 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 PDZD4Q76G19 769 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms