RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 MYBPC2Q14324 1141 aa27.97■■■□□ 2.07
U2AF1-206ENST00000464750 IQCEQ6IPM2 695 aa27.97■■■□□ 2.07
U2AF1-206ENST00000464750 PDZD4Q76G19 769 aaPredicted RBP27.97■■■□□ 2.07
U2AF1-206ENST00000464750 NT5DC4Q86YG4 428 aa27.97■■■□□ 2.07
U2AF1-206ENST00000464750 HPS3Q969F9 1004 aa27.97■■■□□ 2.07
U2AF1-206ENST00000464750 PHOX2BQ99453 314 aa27.97■■■□□ 2.07
U2AF1-206ENST00000464750 ARHGEF3Q9NR81 526 aa27.97■■■□□ 2.07
U2AF1-206ENST00000464750 RBAKQ9NYW8 714 aaPredicted RBP27.97■■■□□ 2.07
U2AF1-206ENST00000464750 GDE1Q9NZC3 331 aa27.97■■■□□ 2.07
U2AF1-206ENST00000464750 CEP72Q9P209 647 aa27.97■■■□□ 2.07
U2AF1-206ENST00000464750 STK25O00506 426 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 PI15O43692 258 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 LDHAP00338 332 aaKnown RBP27.96■■■□□ 2.07
U2AF1-206ENST00000464750 GPC5P78333 572 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 AMPD3Q01432 767 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 GPR17Q13304 367 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 STXBP4Q6ZWJ1 553 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 GLIS3Q8NEA6 775 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 TCEAL4Q96EI5 215 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 ZNF512Q96ME7 567 aaPredicted RBP27.96■■■□□ 2.07
U2AF1-206ENST00000464750 TMEM209Q96SK2 561 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 RTP3Q9BQQ7 232 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 IRF2BPLQ9H1B7 796 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 CRISPLD1Q9H336 500 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 TBC1D17Q9HA65 648 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 FAM86C1Q9NVL1 165 aa27.96■■■□□ 2.07
U2AF1-206ENST00000464750 GOLGA8IPA6NC78 632 aa27.95■■■□□ 2.06
U2AF1-206ENST00000464750 GOLGA8JA6NMD2 632 aa27.95■■■□□ 2.06
U2AF1-206ENST00000464750 H0Y858 1186 aa27.95■■■□□ 2.06
U2AF1-206ENST00000464750 ZNF197O14709 1029 aa27.95■■■□□ 2.06
U2AF1-206ENST00000464750 CYP11A1P05108 521 aa27.95■■■□□ 2.06
U2AF1-206ENST00000464750 CCR2P41597 374 aa27.95■■■□□ 2.06
U2AF1-206ENST00000464750 ME1P48163 572 aa27.95■■■□□ 2.06
U2AF1-206ENST00000464750 CYP4A22Q5TCH4 519 aa27.95■■■□□ 2.06
U2AF1-206ENST00000464750 ARMCX5Q6P1M9 558 aa27.95■■■□□ 2.06
U2AF1-206ENST00000464750 HS6ST3Q8IZP7 471 aa27.95■■■□□ 2.06
U2AF1-206ENST00000464750 NOC3LQ8WTT2 800 aaKnown RBP27.95■■■□□ 2.06
U2AF1-206ENST00000464750 PYM1Q9BRP8 204 aaKnown RBP27.95■■■□□ 2.06
U2AF1-206ENST00000464750 PCIF1Q9H4Z3 704 aa27.95■■■□□ 2.06
U2AF1-206ENST00000464750 DSEQ9UL01 958 aa27.95■■■□□ 2.06
U2AF1-206ENST00000464750 MTMR11A4FU01 709 aa27.94■■■□□ 2.06
U2AF1-206ENST00000464750 EXTL3O43909 919 aa27.94■■■□□ 2.06
U2AF1-206ENST00000464750 TFAMQ00059 246 aaKnown RBP27.94■■■□□ 2.06
U2AF1-206ENST00000464750 DUSP4Q13115 394 aa27.94■■■□□ 2.06
U2AF1-206ENST00000464750 PLD1Q13393 1074 aa27.94■■■□□ 2.06
U2AF1-206ENST00000464750 ATL3Q6DD88 541 aa27.94■■■□□ 2.06
U2AF1-206ENST00000464750 POTEHQ6S545 545 aa27.94■■■□□ 2.06
U2AF1-206ENST00000464750 OR10T2Q8NGX3 314 aa27.94■■■□□ 2.06
U2AF1-206ENST00000464750 ZNF560Q96MR9 790 aa27.94■■■□□ 2.06
U2AF1-206ENST00000464750 MAGEF1Q9HAY2 307 aa27.94■■■□□ 2.06
U2AF1-206ENST00000464750 ASAH2Q9NR71 780 aa27.94■■■□□ 2.06
U2AF1-206ENST00000464750 PCDHA7Q9UN72 937 aa27.94■■■□□ 2.06
U2AF1-206ENST00000464750 NRG2O14511 850 aaPredicted RBP27.93■■■□□ 2.06
U2AF1-206ENST00000464750 CYB561D2O14569 222 aa27.93■■■□□ 2.06
U2AF1-206ENST00000464750 POLR2DO15514 142 aaKnown RBP27.93■■■□□ 2.06
U2AF1-206ENST00000464750 DNM1Q05193 864 aaKnown RBP27.93■■■□□ 2.06
U2AF1-206ENST00000464750 SV2CQ496J9 727 aa27.93■■■□□ 2.06
U2AF1-206ENST00000464750 CENPPQ6IPU0 288 aa27.93■■■□□ 2.06
U2AF1-206ENST00000464750 METTL23Q86XA0 190 aa27.93■■■□□ 2.06
U2AF1-206ENST00000464750 LEMD2Q8NC56 503 aa27.93■■■□□ 2.06
U2AF1-206ENST00000464750 ATOH1Q92858 354 aaPredicted RBP27.93■■■□□ 2.06
U2AF1-206ENST00000464750 FAM13BQ9NYF5 915 aa27.93■■■□□ 2.06
U2AF1-206ENST00000464750 CFAP45Q9UL16 551 aa27.93■■■□□ 2.06
U2AF1-206ENST00000464750 MIA3Q5JRA6 1907 aa27.92■■■□□ 2.06
U2AF1-206ENST00000464750 ECI2O75521 394 aa27.92■■■□□ 2.06
U2AF1-206ENST00000464750 MICAL2O94851 1124 aa27.92■■■□□ 2.06
U2AF1-206ENST00000464750 MYL4P12829 197 aa27.92■■■□□ 2.06
U2AF1-206ENST00000464750 CNNM4Q6P4Q7 775 aa27.92■■■□□ 2.06
U2AF1-206ENST00000464750 CCDC105Q8IYK2 499 aa27.92■■■□□ 2.06
U2AF1-206ENST00000464750 GPD1LQ8N335 351 aa27.92■■■□□ 2.06
U2AF1-206ENST00000464750 ATAD1Q8NBU5 361 aa27.92■■■□□ 2.06
U2AF1-206ENST00000464750 COL4A3Q01955 1670 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 KPNA7A9QM74 516 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 POLR2BP30876 1174 aaKnown RBP27.91■■■□□ 2.06
U2AF1-206ENST00000464750 PNPLA4P41247 253 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 EPHA5P54756 1037 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 FAM26FQ5R3K3 315 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 RESP18Q5W5W9 173 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 PHLDB3Q6NSJ2 640 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 TTC9BQ8N6N2 239 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 C1orf127Q8N9H9 656 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 BORCS6Q96GS4 357 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 FAM84AQ96KN4 292 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 C7orf25Q9BPX7 421 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 DNAJC25Q9H1X3 360 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 SLC27A5Q9Y2P5 690 aa27.91■■■□□ 2.06
U2AF1-206ENST00000464750 KIAA0391O15091 583 aaKnown RBP27.9■■■□□ 2.06
U2AF1-206ENST00000464750 EIF3DO15371 548 aaKnown RBP eCLIP27.9■■■□□ 2.06
U2AF1-206ENST00000464750 MOSPD3O75425 235 aa27.9■■■□□ 2.06
U2AF1-206ENST00000464750 ITGB3P05106 788 aa27.9■■■□□ 2.06
U2AF1-206ENST00000464750 FCARP24071 287 aa27.9■■■□□ 2.06
U2AF1-206ENST00000464750 ALDH1A3P47895 512 aa27.9■■■□□ 2.06
U2AF1-206ENST00000464750 EPHB3P54753 998 aa27.9■■■□□ 2.06
U2AF1-206ENST00000464750 SLC39A12Q504Y0 691 aa27.9■■■□□ 2.06
U2AF1-206ENST00000464750 WSCD1Q658N2 575 aa27.9■■■□□ 2.06
U2AF1-206ENST00000464750 TANGO2Q6ICL3 276 aa27.9■■■□□ 2.06
U2AF1-206ENST00000464750 CACTINQ8WUQ7 758 aaKnown RBP27.9■■■□□ 2.06
U2AF1-206ENST00000464750 ZCWPW1Q9H0M4 648 aa27.9■■■□□ 2.06
U2AF1-206ENST00000464750 PDE11AQ9HCR9 933 aa27.9■■■□□ 2.06
U2AF1-206ENST00000464750 AGAP1Q9UPQ3 857 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms