RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 DOT1LQ8TEK3 1739 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 EXOC1LA0A1B0GW35 172 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 USP17L5A8MUK1 530 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 NKRFO15226 690 aaKnown RBP eCLIP7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 EDF1O60869 148 aaKnown RBP7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 TGDSO95455 350 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 ACSL3O95573 720 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 PSMC4P43686 418 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 PTDSS1P48651 473 aaKnown RBP7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 XIAPP98170 497 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 ARHGAP4P98171 946 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 MAP3K10Q02779 954 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 CDK18Q07002 472 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 AP1B1Q10567 949 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 BFSP1Q12934 665 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 ZNF211Q13398 564 aaPredicted RBP7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 MESDQ14696 234 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 CCNG2Q16589 344 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 LONRF1Q17RB8 773 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 WDR78Q5VTH9 848 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 KRT39Q6A163 491 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 ANO7Q6IWH7 933 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 RHBDF2Q6PJF5 856 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 TPTE2Q6XPS3 522 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 TRIM72Q6ZMU5 477 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 EP400NLQ6ZTU2 488 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 NBPF5PQ86XG9 351 aaPredicted RBP7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 ZNF677Q86XU0 584 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 ECHDC2Q86YB7 292 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 C12orf56Q8IXR9 622 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 ST13P4Q8IZP2 240 aaPredicted RBP7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 SYCP3Q8IZU3 236 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 VPS52Q8N1B4 723 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 KIF2BQ8N4N8 673 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 ZCCHC9Q8N567 271 aaKnown RBP7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 MYCT1Q8N699 235 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 CNBD1Q8NA66 436 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 DRAXINQ8NBI3 349 aaPredicted RBP7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 STKLD1Q8NE28 680 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 FAM13CQ8NE31 585 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 ZNF564Q8TBZ8 553 aaPredicted RBP7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 ALG3Q92685 438 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 ZBTB10Q96DT7 871 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 MAML3Q96JK9 1138 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 SLC4A9Q96Q91 983 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 NACC1Q96RE7 527 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 BTBD10Q9BSF8 475 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 FAM167BQ9BTA0 163 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 TBC1D10AQ9BXI6 508 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 ANO3Q9BYT9 981 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 TRIM55Q9BYV6 548 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 FRMD8P1Q9BZ68 369 aaPredicted RBP7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 MYLK2Q9H1R3 596 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 GOLPH3Q9H4A6 298 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 DNAJC18Q9H819 358 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 DMAC2Q9NW81 257 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 WDR35Q9P2L0 1181 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 SLX4Q8IY92 1834 aa7.61□□□□□ -1.19
CLSTN1-204ENST00000464286 ZMYM2Q9UBW7 1377 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 CDK5RAP2Q96SN8 1893 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 DPPA5A6NC42 116 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 POM121CA8CG34 1229 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 TMEM110-MUSTN1A8MSY1 372 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 GYG2O15488 501 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 PSTPIP1O43586 416 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 RAD21O60216 631 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 LZTS3O60299 673 aaPredicted RBP7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 DNAJC6O75061 913 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 MED24O75448 989 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 HAUS5O94927 633 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 ASMTLO95671 621 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 IL1BP01584 269 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 HLA-DOAP06340 250 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 KRT15P19012 456 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 SP100P23497 879 aaPredicted RBP7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 GTF2H1P32780 548 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 CIITAP33076 1130 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 BTDP43251 543 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 ITGA8P53708 1063 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 ZBTB16Q05516 673 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 PABPC4Q13310 644 aaKnown RBP eCLIP7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 LAMB3Q13751 1172 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 LRRC14Q15048 493 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 AOC3Q16853 763 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 KLHL38Q2WGJ6 581 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 EML3Q32P44 896 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 GNPTABQ3T906 1256 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 DNAL1Q4LDG9 190 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 EAPPQ56P03 285 aaPredicted RBP7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 ARSHQ5FYA8 562 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 LIN9Q5TKA1 542 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 FAM91A1Q658Y4 838 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 ARHGAP22Q7Z5H3 698 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 ANKS1BQ7Z6G8 1248 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 ADAT2Q7Z6V5 191 aaKnown RBP7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 TRABD2AQ86V40 505 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 CATSPER3Q86XQ3 398 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 MAPKAPK5Q8IW41 473 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 FAM178BQ8IXR5 827 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms