RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 AP5M1Q9H0R1 490 aa23.13■■□□□ 1.29
PDLIM2-216ENST00000464275 HAS3O00219 553 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 SHOX2O60902 331 aaPredicted RBP23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 GRM5P41594 1212 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 SLC1A1P43005 524 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 MARCKSL1P49006 195 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 TMEM132DQ14C87 1099 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 KIZQ2M2Z5 673 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 MAATS1Q7Z4T9 603 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 FAM49AQ9H0Q0 323 aaPredicted RBP23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 NXF1Q9UBU9 619 aaKnown RBP23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 POLIQ9UNA4 740 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 SCINQ9Y6U3 715 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 GOLGA6CA6NDK9 693 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 GPR32O75388 356 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 ITGB3P05106 788 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 GOLGA6DP0CG33 693 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 CYP2C9P11712 490 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 SSTR3P32745 418 aaPredicted RBP23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 PTP4A2Q12974 167 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 PCBP1Q15365 356 aaKnown RBP eCLIP23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 MREGQ8N565 214 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 CASKIN2Q8WXE0 1202 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 RUFY1Q96T51 708 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 ZNF518BQ9C0D4 1074 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 VRTNQ9H8Y1 702 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 GOLGA6AQ9NYA3 693 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 PCDHGC3Q9UN70 934 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 C2CD2Q9Y426 696 aa23.12■■□□□ 1.29
PDLIM2-216ENST00000464275 BHMG1C9JSJ3 638 aaPredicted RBP23.11■■□□□ 1.29
PDLIM2-216ENST00000464275 MYO1FO00160 1098 aa23.11■■□□□ 1.29
PDLIM2-216ENST00000464275 TNPO2O14787 897 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-216ENST00000464275 HSF2BPO75031 334 aa23.11■■□□□ 1.29
PDLIM2-216ENST00000464275 IGHA2P01877 340 aa23.11■■□□□ 1.29
PDLIM2-216ENST00000464275 BRD2P25440 801 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-216ENST00000464275 CARSP49589 748 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-216ENST00000464275 RWDD2BP57060 319 aa23.11■■□□□ 1.29
PDLIM2-216ENST00000464275 SREBF2Q12772 1141 aa23.11■■□□□ 1.29
PDLIM2-216ENST00000464275 PLEKHA7Q6IQ23 1121 aa23.11■■□□□ 1.29
PDLIM2-216ENST00000464275 CXorf38Q8TB03 319 aa23.11■■□□□ 1.29
PDLIM2-216ENST00000464275 LENG1Q96BZ8 264 aaPredicted RBP23.11■■□□□ 1.29
PDLIM2-216ENST00000464275 ZSCAN5CA6NGD5 496 aaPredicted RBP23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 MYL3P08590 195 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 FGFR4P22455 802 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 WDR72Q3MJ13 1102 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 ZNF394Q53GI3 561 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 MMS22LQ6ZRQ5 1243 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 CPNE8Q86YQ8 564 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 TMEM35BQ8NCS4 154 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 CALB1P05937 261 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 MMP8P22894 467 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 ADAM17P78536 824 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 CATSPER4Q7RTX7 472 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 IFT81Q8WYA0 676 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 GDAP1L1Q96MZ0 367 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 PLEKHA4Q9H4M7 779 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 CYP3A43Q9HB55 503 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 ITGA11Q9UKX5 1188 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 PASKQ96RG2 1323 aa23.1■■□□□ 1.29
PDLIM2-216ENST00000464275 FAM155AB1AL88 458 aaPredicted RBP23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 P4HA1P13674 534 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 CDH5P33151 784 aaPredicted RBP23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 TMEM62Q0P6H9 643 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 CUL1Q13616 776 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 C2CD6Q53TS8 623 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 PHLDB2Q86SQ0 1253 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 WHAMMQ8TF30 809 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 KATNAL1Q9BW62 490 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 PLVAPQ9BX97 442 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 PARVAQ9NVD7 372 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 AMACRQ9UHK6 382 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 NFU1Q9UMS0 254 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 TLL2Q9Y6L7 1015 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 ESYT3A0FGR9 886 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 MED7O43513 233 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 PROSCO94903 275 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 NPTXRO95502 500 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 PAEPP09466 180 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 PYGMP11217 842 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 LACTBP83111 547 aaPredicted RBP23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 CRHR2Q13324 411 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 MAMLD1Q13495 774 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 AADACL2Q6P093 401 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 LLGL2Q6P1M3 1020 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 SLC27A1Q6PCB7 646 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 RUFY4Q6ZNE9 571 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 PLEKHA5Q9HAU0 1116 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 NR2E1Q9Y466 385 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 CEP83Q9Y592 693 aa23.09■■□□□ 1.29
PDLIM2-216ENST00000464275 SCN1AP35498 2009 aa23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 STAU1O95793 577 aaKnown RBP23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 DARSP14868 501 aaKnown RBP23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 EIF4BP23588 611 aaKnown RBP23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 POLR2BP30876 1174 aaKnown RBP23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 HOXA11P31270 313 aaPredicted RBP23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 RAP1GAPP47736 663 aa23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 IRX5P78411 483 aaPredicted RBP23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 RBP5P82980 135 aa23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 C1orf131Q8NDD1 294 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms