RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 IFIT1P09914 478 aaKnown RBP4.3□□□□□ -1.72
SCFD1-204ENST00000463622 ZKSCAN1P17029 563 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-204ENST00000463622 SDSP20132 328 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 RGS2P41220 211 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 MRPS5P82675 430 aaKnown RBP4.3□□□□□ -1.72
SCFD1-204ENST00000463622 ZXDAP98168 799 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 TOP3AQ13472 1001 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-204ENST00000463622 USP10Q14694 798 aaKnown RBP4.3□□□□□ -1.72
SCFD1-204ENST00000463622 LONRF2Q1L5Z9 754 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 RNF151Q2KHN1 245 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 HSP90AB4PQ58FF6 505 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 LARP4Q71RC2 724 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCFD1-204ENST00000463622 BRAPQ7Z569 592 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 TAX1BP1Q86VP1 789 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 GIMAP8Q8ND71 665 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-204ENST00000463622 GSTCDQ8NEC7 633 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 TRIM43Q96BQ3 446 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-204ENST00000463622 C1QTNF1Q9BXJ1 281 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 KIAA1683Q9H0B3 1180 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 OSBPL5Q9H0X9 879 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-204ENST00000463622 ECHDC1Q9NTX5 307 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 GALNT8Q9NY28 637 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 DDX20Q9UHI6 824 aaKnown RBP4.3□□□□□ -1.72
SCFD1-204ENST00000463622 SLC4A7Q9Y6M7 1214 aa4.3□□□□□ -1.72
SCFD1-204ENST00000463622 ALPK3Q96L96 1907 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 ECM29Q5VYK3 1845 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 MYO5AQ9Y4I1 1855 aaKnown RBP4.29□□□□□ -1.72
SCFD1-204ENST00000463622 GPR75-ASB3A0A0A6YYF3 556 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-204ENST00000463622 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-204ENST00000463622 GOLIM4O00461 696 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 CLASP2O75122 1294 aaKnown RBP4.29□□□□□ -1.72
SCFD1-204ENST00000463622 MPIG6BO95866 241 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 SLC5A1P13866 664 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 NAT1P18440 290 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 ATP5JP18859 108 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 ITGB8P26012 769 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 AOAHP28039 575 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 HMGCS2P54868 508 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 BACE1P56817 501 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 RHBDL3P58872 404 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 HERVK_113P62684 666 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 TMEM132BQ14DG7 1078 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 TBR1Q16650 682 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 MFSD14CQ5VZR4 134 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 GPR142Q7Z601 462 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 ADGRA1Q86SQ6 560 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 TRPV1Q8NER1 839 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 ERCC4Q92889 916 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-204ENST00000463622 NEIL1Q96FI4 390 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-204ENST00000463622 SEC62Q99442 399 aaKnown RBP4.29□□□□□ -1.72
SCFD1-204ENST00000463622 PORCNQ9H237 461 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 FLRT1Q9NZU1 646 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 SFMBT1Q9UHJ3 866 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 NCOR1O75376 2440 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 A0A0D9SFI3 127 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 C19orf81C9J6K1 198 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 KIAA0355O15063 1070 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 FSHBP01225 129 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 GJA4P35212 333 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 CD83Q01151 205 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 SPDYAQ5MJ70 313 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 TTC39AQ5SRH9 613 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 CCDC129Q6ZRS4 1044 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 OVCH1Q7RTY7 1134 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 NOSTRINQ8IVI9 506 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 IGSF22Q8N9C0 903 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 FAM227BQ96M60 508 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 UHRF1Q96T88 793 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-204ENST00000463622 DPYSL5Q9BPU6 564 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 TSC22D4Q9Y3Q8 395 aa4.29□□□□□ -1.72
SCFD1-204ENST00000463622 CDH23Q9H251 3354 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 TTC41PQ6P2S7 1318 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 DOCK3Q8IZD9 2030 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 DOCK2Q92608 1830 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 TCRBV16S1A1N1A0A5B0 115 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 SLC15A5A6NIM6 579 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 C1QTNF3-AMACRE9PGA6 284 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 SMIM22K7EJ46 135 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 FOXP2O15409 715 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 CNMDO75829 334 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 GLRX3O76003 335 aaKnown RBP4.28□□□□□ -1.72
SCFD1-204ENST00000463622 KRT37O76014 449 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 AMHP03971 560 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 IRX3P78415 501 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-204ENST00000463622 TLE2Q04725 743 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 TRIM60Q495X7 471 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 BMP2KLQ5H9B9 411 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 OTOP2Q7RTS6 562 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 ZNF589Q86UQ0 364 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-204ENST00000463622 REXO1L1PQ8IX06 675 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 SPATA5Q8NB90 893 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 ASB15Q8WXK1 588 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 RNPC3Q96LT9 517 aaKnown RBP4.28□□□□□ -1.72
SCFD1-204ENST00000463622 GBP4Q96PP9 640 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 LRFN3Q9BTN0 628 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 SEC61A2Q9H9S3 476 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.28□□□□□ -1.725e-6■■■□□ 17
SCFD1-204ENST00000463622 GNL3LQ9NVN8 582 aaKnown RBP4.28□□□□□ -1.72
SCFD1-204ENST00000463622 PAG1Q9NWQ8 432 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms