RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 NTHL1P78549 312 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 MYBPC2Q14324 1141 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 KNOP1Q1ED39 458 aaKnown RBP17.52■□□□□ 0.4
COL1A1-202ENST00000463440 KMT5BQ4FZB7 885 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 PABPC1LQ4VXU2 614 aaKnown RBP17.52■□□□□ 0.4
COL1A1-202ENST00000463440 RNF19BQ6ZMZ0 732 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 CBWD2Q8IUF1 395 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 C1orf127Q8N9H9 656 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 CCDC34Q96HJ3 373 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 ANKRD36BP1Q96IX9 119 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 KCNK12Q9HB15 430 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 AGAP1Q9UPQ3 857 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 R3HCC1Q9Y3T6 440 aaKnown RBP17.52■□□□□ 0.4
COL1A1-202ENST00000463440 INSL5Q9Y5Q6 135 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 TECTAO75443 2155 aa17.52■□□□□ 0.39
COL1A1-202ENST00000463440 GOLGA6L4A6NEF3 574 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 KPNA7A9QM74 516 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 TNNC2P02585 160 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 LAMP2P13473 410 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 PTPN2P17706 415 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 CYP2J2P51589 502 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 RBP5P82980 135 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 STK4Q13043 487 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 GPR17Q13304 367 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 TDGQ13569 410 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 SNRNP35Q16560 246 aaKnown RBP17.51■□□□□ 0.39
COL1A1-202ENST00000463440 KRBA2Q6ZNG9 492 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 HFE2Q6ZVN8 426 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 BMP8AQ7Z5Y6 402 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 C12orf56Q8IXR9 622 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 THEM5Q8N1Q8 247 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 ELMOD1Q8N336 334 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 CSGALNACT2Q8N6G5 542 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 LRRC52Q8N7C0 313 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 XXYLT1Q8NBI6 393 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 GOLGA5Q8TBA6 731 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 NXPE3Q969Y0 559 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 MFSD14AQ96MC6 490 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 HCFC1R1Q9NWW0 138 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 DNMT3BQ9UBC3 853 aaKnown RBP17.51■□□□□ 0.39
COL1A1-202ENST00000463440 HCN4Q9Y3Q4 1203 aa17.51■□□□□ 0.39
COL1A1-202ENST00000463440 ZNF202O95125 648 aa17.5■□□□□ 0.39
COL1A1-202ENST00000463440 RPN1P04843 607 aaKnown RBP17.5■□□□□ 0.39
COL1A1-202ENST00000463440 KRT19P08727 400 aa17.5■□□□□ 0.39
COL1A1-202ENST00000463440 OR4Q2P0C623 313 aa17.5■□□□□ 0.39
COL1A1-202ENST00000463440 DUOXA2Q1HG44 320 aa17.5■□□□□ 0.39
COL1A1-202ENST00000463440 RDH13Q8NBN7 331 aa17.5■□□□□ 0.39
COL1A1-202ENST00000463440 PBXIP1Q96AQ6 731 aa17.5■□□□□ 0.39
COL1A1-202ENST00000463440 BORCS6Q96GS4 357 aa17.5■□□□□ 0.39
COL1A1-202ENST00000463440 MTMR12Q9C0I1 747 aa17.5■□□□□ 0.39
COL1A1-202ENST00000463440 GOLPH3LQ9H4A5 285 aa17.5■□□□□ 0.39
COL1A1-202ENST00000463440 INTS13Q9NVM9 706 aa17.5■□□□□ 0.39
COL1A1-202ENST00000463440 CDH7Q9ULB5 785 aa17.5■□□□□ 0.39
COL1A1-202ENST00000463440 DOCK6Q96HP0 2047 aa17.5■□□□□ 0.39
COL1A1-202ENST00000463440 DOCK8Q8NF50 2099 aa17.49■□□□□ 0.39
COL1A1-202ENST00000463440 PRPF40AO75400 957 aaKnown RBP17.49■□□□□ 0.39
COL1A1-202ENST00000463440 KIF20AO95235 890 aa17.49■□□□□ 0.39
COL1A1-202ENST00000463440 RHOP08100 348 aa17.49■□□□□ 0.39
COL1A1-202ENST00000463440 BFSP1Q12934 665 aa17.49■□□□□ 0.39
COL1A1-202ENST00000463440 WSCD1Q658N2 575 aa17.49■□□□□ 0.39
COL1A1-202ENST00000463440 LMBRD2Q68DH5 695 aaPredicted RBP17.49■□□□□ 0.39
COL1A1-202ENST00000463440 IQCEQ6IPM2 695 aa17.49■□□□□ 0.39
COL1A1-202ENST00000463440 WDR49Q8IV35 697 aa17.49■□□□□ 0.39
COL1A1-202ENST00000463440 KIAA0895Q8NCT3 520 aa17.49■□□□□ 0.39
COL1A1-202ENST00000463440 ASIC4Q96FT7 647 aa17.49■□□□□ 0.39
COL1A1-202ENST00000463440 ZNF512Q96ME7 567 aaPredicted RBP17.49■□□□□ 0.39
COL1A1-202ENST00000463440 PGLYRP2Q96PD5 576 aa17.49■□□□□ 0.39
COL1A1-202ENST00000463440 FNBP1Q96RU3 617 aa17.49■□□□□ 0.39
COL1A1-202ENST00000463440 AVENQ9NQS1 362 aaPredicted RBP17.49■□□□□ 0.39
COL1A1-202ENST00000463440 MRPS23Q9Y3D9 190 aaKnown RBP17.49■□□□□ 0.39
COL1A1-202ENST00000463440 EXOC3O60645 756 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 HUS1O60921 280 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 CYP24A1Q07973 514 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 TWF1Q12792 350 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 MYO1EQ12965 1108 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 PLD1Q13393 1074 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 PSMD6Q15008 389 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 SUGP1Q8IWZ8 645 aaKnown RBP17.48■□□□□ 0.39
COL1A1-202ENST00000463440 OR5B17Q8NGF7 314 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 OR10T2Q8NGX3 314 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 CXorf38Q8TB03 319 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 ITFG1Q8TB96 612 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 FGF13Q92913 245 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 CORO1BQ9BR76 489 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 SIX4Q9UIU6 781 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 YIPF1Q9Y548 306 aa17.48■□□□□ 0.39
COL1A1-202ENST00000463440 TSC2P49815 1807 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 TRIOO75962 3097 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 MTMR11A4FU01 709 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 ANHXE9PGG2 379 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 ZNF197O14709 1029 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 RHOBTB3O94955 611 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 PRR29P0C7W0 189 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 DLATP10515 647 aaKnown RBP17.47■□□□□ 0.39
COL1A1-202ENST00000463440 TNNI1P19237 187 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 ALDH1A3P47895 512 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 SMARCB1Q12824 385 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 DPYDQ12882 1025 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 DUSP4Q13115 394 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 CENPPQ6IPU0 288 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms