RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 TRIOBPQ9H2D6 2365 aa14.89□□□□□ -0.03
PHACTR4-203ENST00000463428 TRAPPC3O43617 180 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 TACC1O75410 805 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 FGF18O76093 207 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 ADCY5O95622 1261 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 RB1P06400 928 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 TPM3P06753 285 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 UCHL3P15374 230 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 FGFR3P22607 806 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 DNAJB2P25686 324 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 CTNNB1P35222 781 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 CDH8P55286 799 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 CUL2Q13617 745 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 FIGNQ5HY92 759 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 IQCEQ6IPM2 695 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 DSTYKQ6XUX3 929 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 RRAGAQ7L523 313 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 DDX53Q86TM3 631 aaKnown RBP14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 PPM1KQ8N3J5 372 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 KBTBD7Q8WVZ9 684 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 TMEM169Q96HH4 297 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 SAMD11Q96NU1 681 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 TGS1Q96RS0 853 aaKnown RBP14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 SMYD3Q9H7B4 428 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 UBE2TQ9NPD8 197 aaPredicted RBP14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 CHST7Q9NS84 486 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 DNAJC12Q9UKB3 198 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 PCDHB8Q9UN66 801 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 FHOD1Q9Y613 1164 aa14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 LAMA2P24043 3122 aaKnown RBP14.88□□□□□ -0.03
PHACTR4-203ENST00000463428 RNF225M0QZC1 329 aaPredicted RBP14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 GABRDO14764 452 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 SYN3O14994 580 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 WEE2P0C1S8 567 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 P4HA1P13674 534 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 TYMPP19971 482 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 ACO1P21399 889 aaKnown RBP14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 TBXAS1P24557 533 aaPredicted RBP14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 RAP1GAPP47736 663 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 TNNC1P63316 161 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 ELAVL2Q12926 359 aaKnown RBP14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 MRPL58Q14197 206 aaKnown RBP14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 WSCD1Q658N2 575 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 PDCL2Q8N4E4 241 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 NEK11Q8NG66 645 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 PCMTD1Q96MG8 357 aaPredicted RBP14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 MMS19Q96T76 1030 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 GPR88Q9GZN0 384 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 CYP3A43Q9HB55 503 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 DAAM1Q9Y4D1 1078 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 NME7Q9Y5B8 376 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 TIMM13Q9Y5L4 95 aaPredicted RBP14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 MYO9BQ13459 2157 aa14.87□□□□□ -0.03
PHACTR4-203ENST00000463428 SF3B1O75533 1304 aaKnown RBP eCLIP14.87□□□□□ -0.035e-6■■■■■ 74.7
PHACTR4-203ENST00000463428 HUS1O60921 280 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 SOD2P04179 222 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 ODC1P11926 461 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 WARSP23381 471 aaKnown RBP14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 TKTP29401 623 aaKnown RBP14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 CDC25BP30305 580 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 POLR2FP61218 127 aaKnown RBP14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 TBX2Q13207 712 aaPredicted RBP14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 FAM171A1Q5VUB5 890 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 SPECC1LQ69YQ0 1117 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 SCARA5Q6ZMJ2 495 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 OSTM1Q86WC4 334 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 TMEM86AQ8N2M4 240 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 APPL2Q8NEU8 664 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 SPPL3Q8TCT6 385 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 WHAMMQ8TF30 809 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 BAP1Q92560 729 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 JAKMIP2Q96AA8 810 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 TIFAQ96CG3 184 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 FAM81BQ96LP2 452 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 RTP3Q9BQQ7 232 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 MRPL45Q9BRJ2 306 aaKnown RBP14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 HERC2P3Q9BVR0 1158 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 FAM124BQ9H5Z6 455 aaPredicted RBP14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 CNTN6Q9UQ52 1028 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 LZTS1Q9Y250 596 aa14.86□□□□□ -0.03
PHACTR4-203ENST00000463428 OAZ2O95190 189 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 GYPCP04921 128 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 RFX1P22670 979 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 DNAJB1P25685 340 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 MFAP3P55082 362 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 JAM2P57087 298 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 KRT17Q04695 432 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 INCA1Q0VD86 236 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 RTP2Q5QGT7 225 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 KIAA0319Q5VV43 1072 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 PPP2R2DQ66LE6 453 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 SMYD5Q6GMV2 418 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 ENOSF1Q7L5Y1 443 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 SPATA18Q8TC71 538 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 SHC3Q92529 594 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 B3GALT6Q96L58 329 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 NUP58Q9BVL2 599 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 STK33Q9BYT3 514 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 EDEM3Q9BZQ6 932 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms